RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 PCDHB9Q9Y5E1 797 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 PTGDR2Q9Y5Y4 395 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 MRASO14807 208 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 PGLSO95336 258 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 URODP06132 367 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 PRR35P0CG20 571 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 UQCRBP14927 111 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 MRPL19P49406 292 aaKnown RBP18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 HK3P52790 923 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 IRX1P78414 480 aaPredicted RBP18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 CACNG1Q06432 222 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 ADGRE1Q14246 886 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 GRB7Q14451 532 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 SPOUT1Q5T280 376 aaKnown RBP18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 ATXN7L2Q5T6C5 722 aaPredicted RBP18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 C1orf53Q5VUE5 145 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 TICAM1Q8IUC6 712 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 GRIN3AQ8TCU5 1115 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 PDLIM5Q96HC4 596 aaKnown RBP18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 BTBD9Q96Q07 612 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 SPG21Q9NZD8 308 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 PCTPQ9UKL6 214 aa18.8■□□□□ 0.6
CROCCP3-202ENST00000420820 A0A0U1RQS6 177 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 BBIP1A8MTZ0 92 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 BTN3A1O00481 513 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 LILRB3O75022 631 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 VPS4BO75351 444 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 MATN4O95460 622 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 C8BP07358 591 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 LYNP07948 512 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 CLCN7P51798 805 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 IL2P60568 153 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 STX1BP61266 288 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 TRAP1Q12931 704 aaKnown RBP18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 PABPC1LQ4VXU2 614 aaKnown RBP18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 TXNDC8Q6A555 127 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 OGFOD2Q6N063 350 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 LILRA2Q8N149 483 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 STK40Q8N2I9 435 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 SNX31Q8N9S9 440 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 EEF1AKMT1Q8WVE0 214 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 ROPN1LQ96C74 230 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 SPAG4Q9NPE6 437 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 SDR39U1Q9NRG7 319 aaPredicted RBP18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 ADA2Q9NZK5 511 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 POLG2Q9UHN1 485 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 ZNF225Q9UK10 706 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 CPQQ9Y646 472 aa18.79■□□□□ 0.6
CROCCP3-202ENST00000420820 SCAMP3O14828 347 aaKnown RBP18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 CSNK1DP48730 415 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 ITIH5Q86UX2 942 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 GPR65Q8IYL9 337 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 AUTS2Q8WXX7 1259 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 GPATCH1Q9BRR8 931 aaKnown RBP18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 NUSAP1Q9BXS6 441 aaKnown RBP18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 CROTQ9UKG9 612 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 PKP3Q9Y446 797 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 TYW5A2RUC4 315 aaKnown RBP18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 PRORSD1PA6NEY8 169 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 K7ERQ8 282 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 GAPDHSO14556 408 aaPredicted RBP18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 HTRA2O43464 458 aaPredicted RBP18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 RNASEH1O60930 286 aaKnown RBP18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 ESRRBO95718 433 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 CCL5P13501 91 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 LBPP18428 481 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 LAG3P18627 525 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 AGTR2P50052 363 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 CDH18Q13634 790 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 ARMC12Q5T9G4 340 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 LYSMD3Q7Z3D4 306 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 TMCO2Q7Z6W1 182 aaPredicted RBP18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 RETREG3Q86VR2 466 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 APCDD1Q8J025 514 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 FAM156AQ8NDB6 213 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 LINGO1Q96FE5 620 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 DUS3LQ96G46 650 aaKnown RBP18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 MYO19Q96H55 970 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 SEMA4BQ9NPR2 832 aaPredicted RBP18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 SLC52A3Q9NQ40 469 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 WBP1LQ9NX94 342 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 GIMAP2Q9UG22 337 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 DHRS7Q9Y394 339 aa18.78■□□□□ 0.6
CROCCP3-202ENST00000420820 A0A0J9YYE9 177 aa18.77■□□□□ 0.6
CROCCP3-202ENST00000420820 ABHD14A-ACY1A0A1B0GW23 586 aa18.77■□□□□ 0.6
CROCCP3-202ENST00000420820 TEX28O15482 410 aa18.77■□□□□ 0.6
CROCCP3-202ENST00000420820 MLYCDO95822 493 aa18.77■□□□□ 0.6
CROCCP3-202ENST00000420820 VCLP18206 1134 aa18.77■□□□□ 0.6
CROCCP3-202ENST00000420820 RFC2P35250 354 aa18.77■□□□□ 0.6
CROCCP3-202ENST00000420820 CDKN3Q16667 212 aa18.77■□□□□ 0.6
CROCCP3-202ENST00000420820 XKR7Q5GH72 579 aa18.77■□□□□ 0.6
CROCCP3-202ENST00000420820 CERS6Q6ZMG9 384 aa18.77■□□□□ 0.6
CROCCP3-202ENST00000420820 HTR3DQ70Z44 454 aa18.77■□□□□ 0.6
CROCCP3-202ENST00000420820 SYVN1Q86TM6 617 aa18.77■□□□□ 0.6
CROCCP3-202ENST00000420820 CPNE9Q8IYJ1 553 aa18.77■□□□□ 0.6
CROCCP3-202ENST00000420820 CMTR2Q8IYT2 770 aaKnown RBP18.77■□□□□ 0.6
CROCCP3-202ENST00000420820 MIER2Q8N344 545 aa18.77■□□□□ 0.6
CROCCP3-202ENST00000420820 CPXM2Q8N436 756 aa18.77■□□□□ 0.6
CROCCP3-202ENST00000420820 SPDL1Q96EA4 605 aa18.77■□□□□ 0.6
CROCCP3-202ENST00000420820 RNF208Q9H0X6 261 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms