RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 PCSK7Q16549 785 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 CLPPQ16740 277 aaPredicted RBP10.93□□□□□ -0.66
SSBP3-206ENST00000420121 AMZ1Q400G9 498 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 MAP9Q49MG5 647 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 TFDP3Q5H9I0 405 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 ZNF648Q5T619 568 aaPredicted RBP10.93□□□□□ -0.66
SSBP3-206ENST00000420121 ARHGAP40Q5TG30 622 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 NKAIN2Q5VXU1 208 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 C11orf63Q6NUN7 778 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 INO80CQ6PI98 192 aaPredicted RBP10.93□□□□□ -0.66
SSBP3-206ENST00000420121 USP53Q70EK8 1073 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 CHST15Q7LFX5 561 aaPredicted RBP10.93□□□□□ -0.66
SSBP3-206ENST00000420121 PIM3Q86V86 326 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 ZNF761Q86XN6 746 aaPredicted RBP10.93□□□□□ -0.66
SSBP3-206ENST00000420121 RCBTB1Q8NDN9 531 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 CCHCR1Q8TD31 782 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 TTC9Q92623 222 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 PMEPA1Q969W9 287 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 ARFGAP3Q9NP61 516 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 UBP1Q9NZI7 540 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 FOXJ2Q9P0K8 574 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 TMEM9Q9P0T7 183 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 TBC1D29Q9UFV1 150 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 REXO2Q9Y3B8 237 aaKnown RBP10.93□□□□□ -0.66
SSBP3-206ENST00000420121 PCDHA13Q9Y5I0 950 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 ZNF462Q96JM2 2506 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 TRBV23OR9-2A0A075B6M9 112 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 PRAMEF33A0A0G2JMD5 474 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 LOC285095A0A1B0GVY8 99 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 TK2O00142 265 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 CHUKO15111 745 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 PRAMEF10O60809 474 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 PMPCBO75439 489 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 NDST3O95803 873 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 JMJD7P0C870 316 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 THRAP10827 490 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 CCL4P13236 92 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 ZNF8P17098 575 aaPredicted RBP10.92□□□□□ -0.66
SSBP3-206ENST00000420121 NFKB1P19838 968 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 CA5AP35218 305 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 ZNF75DP51815 510 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 LIMK2P53671 638 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 TFDP2Q14188 446 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 KHDC1Q4VXA5 237 aaKnown RBP10.92□□□□□ -0.66
SSBP3-206ENST00000420121 PHF19Q5T6S3 580 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 BROXQ5VW32 411 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 ALS2CLQ60I27 953 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 KAZNQ674X7 775 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 IYDQ6PHW0 289 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 ADGRG6Q86SQ4 1221 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 DTX1Q86Y01 620 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 CCDC170Q8IYT3 715 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 ZNF567Q8N184 647 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 TTC30BQ8N4P2 665 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 TRAM1L1Q8N609 369 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 LSM14AQ8ND56 463 aaKnown RBP10.92□□□□□ -0.66
SSBP3-206ENST00000420121 TFB1MQ8WVM0 346 aaKnown RBP10.92□□□□□ -0.66
SSBP3-206ENST00000420121 TMEM159Q96B96 161 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 HAUS1Q96CS2 278 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 CCDC97Q96F63 343 aaPredicted RBP10.92□□□□□ -0.66
SSBP3-206ENST00000420121 OXNAD1Q96HP4 312 aaPredicted RBP10.92□□□□□ -0.66
SSBP3-206ENST00000420121 MRGPRX2Q96LB1 330 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 CCDC74BQ96LY2 380 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 QKIQ96PU8 341 aaKnown RBP eCLIP10.92□□□□□ -0.66
SSBP3-206ENST00000420121 GORASP1Q9BQQ3 440 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 RBSNQ9H1K0 784 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 CARD9Q9H257 536 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 RMI1Q9H9A7 625 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 PDP2Q9P2J9 529 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 SLC23A2Q9UGH3 650 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 ZNHIT2Q9UHR6 403 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 KCNK6Q9Y257 313 aa10.92□□□□□ -0.66
SSBP3-206ENST00000420121 SOWAHDA6NJG2 315 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 HGSO14964 777 aaPredicted RBP10.91□□□□□ -0.66
SSBP3-206ENST00000420121 GRID2O43424 1007 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 ZRANB2O95218 330 aaKnown RBP eCLIP10.91□□□□□ -0.66
SSBP3-206ENST00000420121 FGF3P11487 239 aaPredicted RBP10.91□□□□□ -0.66
SSBP3-206ENST00000420121 ACP5P13686 325 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 CHRNA4P43681 627 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 CLCNKAP51800 687 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 WNT3AP56704 352 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 PEX6Q13608 980 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 PPP2R5EQ16537 467 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 ZNF569Q5MCW4 686 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 PDPK2PQ6A1A2 396 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 RAD9BQ6WBX8 426 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 BBS12Q6ZW61 710 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 BZW1Q7L1Q6 419 aaKnown RBP10.91□□□□□ -0.66
SSBP3-206ENST00000420121 ZC3H18Q86VM9 953 aaKnown RBP10.91□□□□□ -0.66
SSBP3-206ENST00000420121 JAMLQ86YT9 394 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 ZNF547Q8IVP9 402 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 RCOR2Q8IZ40 523 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 OR4D9Q8NGE8 314 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 USP7Q93009 1102 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 GLYATL1Q969I3 302 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 MRFAP1L1Q96HT8 127 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 FCRL5Q96RD9 977 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 CMKLR1Q99788 373 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 ZSCAN5AQ9BUG6 496 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 SPATA16Q9BXB7 569 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms