RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 IFIT1P09914 478 aaKnown RBP3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 ACADSP16219 412 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 NR1D1P20393 614 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 PSMA5P28066 241 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 STIP1P31948 543 aaKnown RBP3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 MDH1P40925 334 aaKnown RBP3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 ZNF131P52739 623 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 UBASH3AP57075 661 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 ARPC4P59998 168 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 MYL5Q02045 173 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 SULT2A1Q06520 285 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 KLC1Q07866 573 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 TAF11Q15544 211 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 CCDC152Q4G0S7 254 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 WDR45BQ5MNZ6 344 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 PRAMEF19Q5SWL8 479 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 FNBP1LQ5T0N5 605 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 CFAP58Q5T655 872 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 TBC1D9BQ66K14 1250 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 ATG9BQ674R7 924 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 ATG16L1Q676U5 607 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 NAA16Q6N069 864 aaPredicted RBP3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 IRGCQ6NXR0 463 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 TMEM71Q6P5X7 295 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 NCCRP1Q6ZVX7 275 aaPredicted RBP3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 MAATS1Q7Z4T9 603 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 RBM23Q86U06 439 aaKnown RBP3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 ZNF329Q86UD4 541 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 LRRC49Q8IUZ0 686 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 CD302Q8IX05 232 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 NME8Q8N427 588 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 SETD9Q8NE22 299 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 STKLD1Q8NE28 680 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 TNIP2Q8NFZ5 429 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 RUFY2Q8WXA3 655 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 CTNNBL1Q8WYA6 563 aaPredicted RBP3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 KIFAP3Q92845 792 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 HVCN1Q96D96 273 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 DHTKD1Q96HY7 919 aaPredicted RBP3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 ZNF570Q96NI8 536 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 SLITRK1Q96PX8 696 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 CCT8L2Q96SF2 557 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 SH3GL1Q99961 368 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 POLDIP3Q9BY77 421 aaKnown RBP3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 NSRP1Q9H0G5 558 aaKnown RBP3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 CD93Q9NPY3 652 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 ATP8A2Q9NTI2 1148 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 QPCTLQ9NXS2 382 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 MIS18AQ9NYP9 233 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 PDP2Q9P2J9 529 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 TUBGCP4Q9UGJ1 667 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 SH3GLB1Q9Y371 365 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 C2CD2Q9Y426 696 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 CYP46A1Q9Y6A2 500 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 LRRIQ1Q96JM4 1722 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 ABCA9Q8IUA7 1624 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 OVOS2A0A0G2JMS6 1433 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 OVOS2A0A0J9YW53 1432 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 CPSF1Q10570 1443 aaKnown RBP3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 OVOS2Q6IE36 1432 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 CDK12Q9NYV4 1490 aaPredicted RBP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 CEMIPQ8WUJ3 1361 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 ABCC12Q96J65 1359 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 A0A087WYN8 130 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 ARHGAP10A1A4S6 786 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 GMNCA6NCL1 334 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 TMEM110-MUSTN1A8MSY1 372 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 C17orf100A8MU93 164 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 H3BQV1 296 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 P4HA2O15460 535 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 TIMM44O43615 452 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 DIAPH2O60879 1101 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 LDB3O75112 727 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 ADAP00813 363 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 CLTAP09496 248 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 XBP1P17861 261 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 CASP14P31944 242 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 KRT9P35527 623 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 PCK1P35558 622 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 PSMC2P35998 433 aaKnown RBP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 PGM1P36871 562 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 PPP3CCP48454 512 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 ACADVLP49748 655 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 SERPINB8P50452 374 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 BLKP51451 505 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 ARSFP54793 590 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 HDAC4P56524 1084 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 VAMP2P63027 116 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 YWHAZP63104 245 aaKnown RBP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 TLE2Q04725 743 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 ITIH4Q14624 930 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 KARSQ15046 597 aaKnown RBP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 PPP1R7Q15435 360 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 RPE65Q16518 533 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 SLC18A3Q16572 532 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 ACCSLQ4AC99 568 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 CFAP157Q5JU67 520 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms