RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 GALCP54803 685 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 ACSM2AQ08AH3 577 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 DDX10Q13206 875 aaKnown RBP4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 GTF2H2Q13888 395 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 PNLIPRP3Q17RR3 467 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 ZNF805Q5CZA5 627 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 CCDC30Q5VVM6 783 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 TRNP1Q6NT89 227 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 GTF2H2CQ6P1K8 395 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 GLDNQ6ZMI3 551 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 MAATS1Q7Z4T9 603 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 TSPAN33Q86UF1 283 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 CTAGE4Q8IX94 777 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 RASGEF1CQ8N431 466 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 WDTC1Q8N5D0 677 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 PAF1Q8N7H5 531 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 HM13Q8TCT9 377 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 ALG14Q96F25 216 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 HARBI1Q96MB7 349 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 QRFPRQ96P65 431 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 SEPT5Q99719 369 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 RRP7BPQ9NSQ0 103 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 CWC15Q9P013 229 aaKnown RBP4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 STK39Q9UEW8 545 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 FRMD3A2A2Y4 597 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 A8MZ25 164 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 C16orf97H3BN30 126 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 KCNN4O15554 427 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 IGKV3-20P01619 116 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 CHMP24386 653 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 MRPS34P82930 218 aaKnown RBP4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 SETQ01105 290 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 SPOCK1Q08629 439 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 MAD2L1Q13257 205 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 SYT16Q17RD7 645 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 ASTE1Q2TB18 679 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 ZNF628Q5EBL2 1059 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 IRAK1BP1Q5VVH5 260 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 PMS2CLQ68D20 193 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 OR7E24Q6IFN5 339 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 CFAP77Q6ZQR2 320 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 Q75L30 129 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 GPR180Q86V85 440 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 MAP7D3Q8IWC1 876 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 NGEFQ8N5V2 710 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 KCNH5Q8NCM2 988 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 RBM15BQ8NDT2 890 aaKnown RBP4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 OR13A1Q8NGR1 328 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 FEM1CQ96JP0 617 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 NEUROD6Q96NK8 337 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 MMP28Q9H239 520 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 ABCF3Q9NUQ8 709 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 EHD2Q9NZN4 543 aa4.29□□□□□ -1.72
HMGB1P49-201ENST00000418882 KIF26BQ2KJY2 2108 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 SMCHD1A6NHR9 2005 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 A0A0B4J293 547 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 ZCWPW2A0A1B0GU75 182 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 A0A1W2PS18 150 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 PI4KAP2A4QPH2 592 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 ERVV-2B6SEH9 535 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 TMEM178BH3BS89 294 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 P2RY10O00398 339 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 ZNHIT1O43257 154 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 WDR1O75083 606 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 NDUFS3O75489 264 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 DDX58O95786 925 aaKnown RBP4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 CRYAAP02489 173 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 POLR2CP19387 275 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 CAPN3P20807 821 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 GOLGA8DPQ0D2H9 430 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 HYAL1Q12794 435 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 EIF4A2Q14240 407 aaKnown RBP4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 ADIPOQQ15848 244 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 RAB6CQ53S08 254 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 FAAH2Q6GMR7 532 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 KIAA0930Q6ICG6 404 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 FAM171BQ6P995 826 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 ZNF852Q6ZMS4 543 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 IKBIPQ70UQ0 350 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 RNF168Q8IYW5 571 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 PDILTQ8N807 584 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 SLC24A4Q8NFF2 622 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 OR8K5Q8NH50 307 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 OR52I2Q8NH67 350 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 THAP6Q8TBB0 222 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 USP6NLQ92738 828 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 HDAC2Q92769 488 aaKnown RBP4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 GFI1Q99684 422 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 POLR3CQ9BUI4 534 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 RAB6CQ9H0N0 254 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 KRT84Q9NSB2 600 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 DIAPH3Q9NSV4 1193 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 TAAR2Q9P1P5 351 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 ZNF112Q9UJU3 913 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 FBXW11Q9UKB1 542 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 POU2F3Q9UKI9 436 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 B3GALT5Q9Y2C3 310 aa4.28□□□□□ -1.72
HMGB1P49-201ENST00000418882 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 EIF4E1BA6NMX2 242 aaKnown RBP4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 HS3ST1O14792 307 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms