RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 SNX4O95219 450 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 ECDO95905 644 aaPredicted RBP11.98□□□□□ -0.49
UBR4-205ENST00000417040 PSEN2P49810 448 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 MPP5Q8N3R9 675 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 LENG9Q96B70 501 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 RHOJQ9H4E5 214 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.98□□□□□ -0.49
UBR4-205ENST00000417040 PTTG2Q9NZH5 202 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 CD84Q9UIB8 345 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 AJAP1Q9UKB5 411 aaPredicted RBP11.98□□□□□ -0.49
UBR4-205ENST00000417040 PDE10AQ9Y233 779 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 STX16-NPEPL1H3BU86 382 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 J3QRK9 145 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 STX16O14662 325 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 MDM4O15151 490 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 DNAJA2O60884 412 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 MTRF1O75570 445 aaKnown RBP11.98□□□□□ -0.49
UBR4-205ENST00000417040 NR2F6P10588 404 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 OR2B6P58173 313 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 PLEKHG4Q58EX7 1191 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 LRRC20Q8TCA0 184 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 FBXL8Q96CD0 374 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 MFSD14AQ96MC6 490 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 ZCCHC2Q9C0B9 1178 aaKnown RBP11.98□□□□□ -0.49
UBR4-205ENST00000417040 ELAC1Q9H777 363 aaKnown RBP11.98□□□□□ -0.49
UBR4-205ENST00000417040 PAGE1O75459 146 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 CLPXO76031 633 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 CATP04040 527 aaKnown RBP11.98□□□□□ -0.49
UBR4-205ENST00000417040 RPS12P25398 132 aaKnown RBP11.98□□□□□ -0.49
UBR4-205ENST00000417040 ATP5C1P36542 298 aaKnown RBP11.98□□□□□ -0.49
UBR4-205ENST00000417040 MATKP42679 507 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 CCR10P46092 362 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 MAZP56270 477 aaKnown RBP11.98□□□□□ -0.49
UBR4-205ENST00000417040 CPTPQ5TA50 214 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 COLGALT2Q8IYK4 626 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 TTC29Q8NA56 475 aaPredicted RBP11.98□□□□□ -0.49
UBR4-205ENST00000417040 LSM14AQ8ND56 463 aaKnown RBP11.98□□□□□ -0.49
UBR4-205ENST00000417040 ZNF395Q9H8N7 513 aaPredicted RBP11.98□□□□□ -0.49
UBR4-205ENST00000417040 PIK3C2BO00750 1634 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 CLDN25C9JDP6 229 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 UGT1A6P19224 532 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 UGT1A1P22309 533 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 UGT1A4P22310 534 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 UGT1A3P35503 534 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 UGT1A5P35504 534 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 MAN2A2P49641 1150 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 CD83Q01151 205 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 CELF3Q5SZQ8 465 aaKnown RBP11.98□□□□□ -0.49
UBR4-205ENST00000417040 CCNYL2Q5T2Q4 361 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 FSTL4Q6MZW2 842 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 VGLL2Q8N8G2 317 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 TRPV1Q8NER1 839 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 MYOCQ99972 504 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 LRTM1Q9HBL6 345 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 BAIAP2Q9UQB8 552 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 USP32Q8NFA0 1604 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 OR10H2O60403 315 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 PQBP1O60828 265 aaKnown RBP11.98□□□□□ -0.49
UBR4-205ENST00000417040 GPR1P46091 355 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 PSMD5Q16401 504 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 EEF1DP3Q658K8 133 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 VSTM1Q6UX27 236 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 ZNF730Q6ZMV8 503 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 ZNF410Q86VK4 478 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 PLD5Q8N7P1 536 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 HSD3B7Q9H2F3 369 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 SEMA3GQ9NS98 782 aa11.98□□□□□ -0.49
UBR4-205ENST00000417040 TCRBV7S3A2A0A539 114 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 RPN2P04844 631 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 HNMTP50135 292 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 ZNF366Q8N895 744 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 AGO3Q9H9G7 860 aaKnown RBP11.97□□□□□ -0.49
UBR4-205ENST00000417040 STARD7Q9NQZ5 370 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 FAM198AQ9UFP1 575 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 DNMT3LQ9UJW3 386 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 A8MV72 311 aaPredicted RBP11.97□□□□□ -0.49
UBR4-205ENST00000417040 MID1O15344 667 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 TBX10O75333 385 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 SLC25A14O95258 325 aaPredicted RBP11.97□□□□□ -0.49
UBR4-205ENST00000417040 LPOP22079 712 aaPredicted RBP11.97□□□□□ -0.49
UBR4-205ENST00000417040 CDH12P55289 794 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 ANO7Q6IWH7 933 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 SLC26A9Q7LBE3 791 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 SIDT2Q8NBJ9 832 aaKnown RBP11.97□□□□□ -0.49
UBR4-205ENST00000417040 HJURPQ8NCD3 748 aaPredicted RBP11.97□□□□□ -0.49
UBR4-205ENST00000417040 CENPNQ96H22 339 aaPredicted RBP11.97□□□□□ -0.49
UBR4-205ENST00000417040 ZNF358Q9NW07 568 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 AGO1Q9UL18 857 aaKnown RBP11.97□□□□□ -0.49
UBR4-205ENST00000417040 ZNF99A8MXY4 864 aaPredicted RBP11.97□□□□□ -0.49
UBR4-205ENST00000417040 ADM5C9JUS6 153 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 TRAFD1O14545 582 aaPredicted RBP11.97□□□□□ -0.49
UBR4-205ENST00000417040 TGFBR2P37173 567 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 ATXN1P54253 815 aaKnown RBP11.97□□□□□ -0.49
UBR4-205ENST00000417040 DNASE1L3Q13609 305 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 ZACNQ401N2 412 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 IDNKQ5T6J7 187 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 SH3PXD2AQ5TCZ1 1133 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 ANXA8L1Q5VT79 327 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 TMEM198Q66K66 360 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 BICRALQ6AI39 1079 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms