RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 USP45Q70EL2 814 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 BZW1Q7L1Q6 419 aaKnown RBP13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 TIPARPQ7Z3E1 657 aaKnown RBP13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 TMTC1Q8IUR5 882 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 CCDC13Q8IYE1 715 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 APOBEC4Q8WW27 367 aaKnown RBP13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 KIAA1143Q96AT1 154 aaPredicted RBP13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 MIB2Q96AX9 1013 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 DTD2Q96FN9 168 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 TSGA13Q96PP4 275 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 DPYSL5Q9BPU6 564 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 SPRY4Q9C004 299 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 GOLGA6AQ9NYA3 693 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 AMACRQ9UHK6 382 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 SLC17A4Q9Y2C5 497 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 TRBV23OR9-2A0A075B6M9 112 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 PRR19A6NJB7 356 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 A8MU76 341 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 MTSS1O43312 755 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 HTRA2O43464 458 aaPredicted RBP13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 HEXIM1O94992 359 aaKnown RBP13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 JCHAINP01591 159 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 COMTP21964 271 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 LHCGRP22888 699 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 MAP4P27816 1152 aaKnown RBP13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 VIPR1P32241 457 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 DYNLT1P63172 113 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 GPLD1P80108 840 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 GBE1Q04446 702 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 AP1B1Q10567 949 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 PDK1Q15118 436 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 TCEAL1Q15170 157 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 RAET1GQ6H3X3 334 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 C16orf46Q6P387 395 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 HSD11B1LQ7Z5J1 315 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 PGBD5Q8N414 524 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 TEX26Q8N6G2 289 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 PQLC3Q8N755 202 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 STARD8Q92502 1023 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 FAF2Q96CS3 445 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 AHCYL2Q96HN2 611 aaKnown RBP13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 TEFMQ96QE5 360 aaKnown RBP13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 PANX2Q96RD6 677 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 APMAPQ9HDC9 416 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 TP53TG5Q9Y2B4 290 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 ALG6Q9Y672 507 aa13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 EPN1Q9Y6I3 576 aaPredicted RBP13.13□□□□□ -0.31
CTHRC1-202ENST00000415886 GOLGA6L6A8MZA4 724 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 ZNF487B1APH4 448 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 PPP1R12AO14974 1030 aaPredicted RBP13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 PGLSO95336 258 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 IVLP07476 585 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 MC2RQ01718 297 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 PTPRRQ15256 657 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 VSIG1Q86XK7 387 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 SLC37A2Q8TED4 501 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 MAML1Q92585 1016 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 FATE1Q969F0 183 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 SCRN2Q96FV2 425 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 CALR3Q96L12 384 aaKnown RBP13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 OR2M4Q96R27 311 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 SLC38A3Q99624 504 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 EFHD1Q9BUP0 239 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 BRD8Q9H0E9 1235 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 LRRC4CQ9HCJ2 640 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 DTLQ9NZJ0 730 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 PDP2Q9P2J9 529 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 TMEM98Q9Y2Y6 226 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 HYOU1Q9Y4L1 999 aa13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 MRPS18BQ9Y676 258 aaKnown RBP13.12□□□□□ -0.31
CTHRC1-202ENST00000415886 A0A0U1RQS6 177 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 NPIPB15A6NHN6 443 aaPredicted RBP13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 K7EM74 188 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 STK17BO94768 372 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 ZRANB2O95218 330 aaKnown RBP eCLIP13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 LCA5LO95447 670 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 EML2O95834 649 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 SOD1P00441 154 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 CTPS1P17812 591 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 TCN2P20062 427 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 FASLGP48023 281 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 NR2C2P49116 596 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 MLLT10P55197 1068 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 ABHD18Q0P651 414 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 SLC10A2Q12908 348 aaPredicted RBP13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 KLRB1Q12918 225 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 TRAF2Q12933 501 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 PEX6Q13608 980 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 SEPT6Q14141 434 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 TFDP2Q14188 446 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 KAZNQ674X7 775 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 CCDC70Q6NSX1 233 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 CEACAM20Q6UY09 585 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 Q6ZVL8 140 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 MARK2Q7KZI7 788 aaKnown RBP13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 KDELC2Q7Z4H8 507 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 ARHGAP22Q7Z5H3 698 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 DAAM2Q86T65 1068 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 TSPAN33Q86UF1 283 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms