RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 NXPE1Q8N323 547 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 FSTL5Q8N475 847 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-207ENST00000415107 SAP25Q8TEE9 199 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 ZNF514Q96K75 400 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-207ENST00000415107 ZNF778Q96MU6 729 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 CARD6Q9BX69 1037 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 ZCCHC2Q9C0B9 1178 aaKnown RBP11.81□□□□□ -0.52
ATG4B-207ENST00000415107 ASB8Q9H765 288 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 FGF22Q9HCT0 170 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 CHRAC1Q9NRG0 131 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 FAM114A2Q9NRY5 505 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 SAMD15Q9P1V8 674 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 KLQ9UEF7 1012 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 ANAPC5Q9UJX4 755 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 PNMA8BQ9ULN7 279 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-207ENST00000415107 FNDC3AQ9Y2H6 1198 aaKnown RBP11.81□□□□□ -0.52
ATG4B-207ENST00000415107 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.81□□□□□ -0.52
ATG4B-207ENST00000415107 TEX264Q9Y6I9 313 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 SLC30A1Q9Y6M5 507 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 KNL1Q8NG31 2342 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 ZCWPW2A0A1B0GU75 182 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 KLHL33A6NCF5 533 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 GOLGA8MH3BSY2 632 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 BUD23O43709 281 aaKnown RBP11.8□□□□□ -0.52
ATG4B-207ENST00000415107 DNAJC6O75061 913 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 PIAS2O75928 621 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 SLC25A14O95258 325 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-207ENST00000415107 PGAM1P18669 254 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 PAMP19021 973 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 ACRV1P26436 265 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 ARNTP27540 789 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 ARCN1P48444 511 aaKnown RBP11.8□□□□□ -0.52
ATG4B-207ENST00000415107 SRP54P61011 504 aaKnown RBP11.8□□□□□ -0.52
ATG4B-207ENST00000415107 DHX9Q08211 1270 aaKnown RBP11.8□□□□□ -0.52
ATG4B-207ENST00000415107 LRP8Q14114 963 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 KCTD19Q17RG1 926 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-207ENST00000415107 AARS2Q5JTZ9 985 aaKnown RBP11.8□□□□□ -0.52
ATG4B-207ENST00000415107 GPRC6AQ5T6X5 926 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 LYPLAL1Q5VWZ2 237 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 ENPP7Q6UWV6 458 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 ZDHHC24Q6UX98 284 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 PACS1Q6VY07 963 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 KDM7AQ6ZMT4 941 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 PHACTR4Q8IZ21 702 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 EIF1ADQ8N9N8 165 aaKnown RBP11.8□□□□□ -0.52
ATG4B-207ENST00000415107 GPR150Q8NGU9 434 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.8□□□□□ -0.522e-7■■■■■ 62.8
ATG4B-207ENST00000415107 MFSD3Q96ES6 412 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 STAMBPL1Q96FJ0 436 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 PDXPQ96GD0 296 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 EBNA1BP2Q99848 306 aaKnown RBP11.8□□□□□ -0.52
ATG4B-207ENST00000415107 TRIM31Q9BZY9 425 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 TM7SF3Q9NS93 570 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 RXFP3Q9NSD7 469 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 DMGDHQ9UI17 866 aaKnown RBP11.8□□□□□ -0.52
ATG4B-207ENST00000415107 KLF15Q9UIH9 416 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 GPR34Q9UPC5 381 aa11.8□□□□□ -0.52
ATG4B-207ENST00000415107 OAS3Q9Y6K5 1087 aaKnown RBP11.8□□□□□ -0.52
ATG4B-207ENST00000415107 CCDC162PA2VCL2 907 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 PRR19A6NJB7 356 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 TPP1O14773 563 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 FLRT2O43155 660 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 KCNJ13O60928 360 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 TNFP01375 233 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 POLBP06746 335 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 GSTM1P09488 218 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 JUNDP17535 347 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 OGNP20774 298 aaKnown RBP11.79□□□□□ -0.52
ATG4B-207ENST00000415107 SDHBP21912 280 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 NMBRP28336 390 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 CLCNKAP51800 687 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 PRAMEP78395 509 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 CRADDP78560 199 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 GSTM4Q03013 218 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 CUL1Q13616 776 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 SUZ12Q15022 739 aaKnown RBP11.79□□□□□ -0.52
ATG4B-207ENST00000415107 TYSND1Q2T9J0 566 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 INAVAQ3KP66 663 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 ANKRD20A4Q4UJ75 823 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 MSS51Q4VC12 460 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 PYCR3Q53H96 274 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 SPANXN3Q5MJ09 141 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 DNTTIP2Q5QJE6 756 aaKnown RBP11.79□□□□□ -0.52
ATG4B-207ENST00000415107 FNBP1LQ5T0N5 605 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 STEAP4Q687X5 459 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 ZNF449Q6P9G9 518 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 LVRNQ6Q4G3 990 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 CEP128Q6ZU80 1094 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 CENPUQ71F23 418 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 ADGRG6Q86SQ4 1221 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 RELL1Q8IUW5 271 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 ZNF548Q8NEK5 533 aaPredicted RBP11.79□□□□□ -0.52
ATG4B-207ENST00000415107 OR4L1Q8NH43 312 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 FBXO25Q8TCJ0 367 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 OR1E3Q8WZA6 343 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 HDAC10Q969S8 669 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 LINC00615Q96LM1 132 aaPredicted RBP11.79□□□□□ -0.52
ATG4B-207ENST00000415107 WDR83Q9BRX9 315 aaKnown RBP11.79□□□□□ -0.52
ATG4B-207ENST00000415107 LRRC61Q9BV99 259 aa11.79□□□□□ -0.52
ATG4B-207ENST00000415107 SLC13A1Q9BZW2 595 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms