RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 FAM47DPA6NHR8 397 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 PRAMEF26H0Y7S4 382 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 SGTAO43765 313 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 RPS3P23396 243 aaKnown RBP eCLIP13.17□□□□□ -0.31e-10■□□□□ 10.3
CNN3-203ENST00000415017 CD27P26842 260 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 MAT2AP31153 395 aaKnown RBP13.17□□□□□ -0.3
CNN3-203ENST00000415017 PI4KAP42356 2102 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 TTPAP49638 278 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 CSRP3P50461 194 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 CSE1LP55060 971 aaKnown RBP13.17□□□□□ -0.3
CNN3-203ENST00000415017 B4GALNT1Q00973 533 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 ILF2Q12905 390 aaKnown RBP13.17□□□□□ -0.3
CNN3-203ENST00000415017 CTBP1Q13363 440 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 CASP8Q14790 479 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 EFTUD2Q15029 972 aaKnown RBP eCLIP13.17□□□□□ -0.3
CNN3-203ENST00000415017 DBN1Q16643 649 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 ZNF789Q5FWF6 425 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 AARS2Q5JTZ9 985 aaKnown RBP13.17□□□□□ -0.3
CNN3-203ENST00000415017 GPRC6AQ5T6X5 926 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 ALS2CLQ60I27 953 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 PMS2CLQ68D20 193 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 ADGRD1Q6QNK2 874 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 LRIG3Q6UXM1 1119 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 SERPINA9Q86WD7 417 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 PNPLA1Q8N8W4 532 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 DCAKDQ8WVC6 231 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 KLK6Q92876 244 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 FOXJ1Q92949 421 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 CPNE1Q99829 537 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 SPATA16Q9BXB7 569 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 C1QTNF1Q9BXJ1 281 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 ROPN1BQ9BZX4 212 aaPredicted RBP13.17□□□□□ -0.3
CNN3-203ENST00000415017 VIPAS39Q9H9C1 493 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 ROPN1Q9HAT0 212 aaPredicted RBP13.17□□□□□ -0.3
CNN3-203ENST00000415017 ZNF446Q9NWS9 450 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 ZDHHC3Q9NYG2 299 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 ZFATQ9P243 1243 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 SLC17A6Q9P2U8 582 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 SLC24A2Q9UI40 661 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 INVSQ9Y283 1065 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 PCDHGA2Q9Y5H1 932 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 ZFC3H1O60293 1989 aaKnown RBP13.17□□□□□ -0.3
CNN3-203ENST00000415017 VPS13AQ96RL7 3174 aa13.17□□□□□ -0.3
CNN3-203ENST00000415017 A0A1W2PR77 199 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 PRR23AA6NEV1 266 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 POM121BA6NF01 834 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 SLC31A1O15431 190 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 NDUFS2O75306 463 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 PIAS1O75925 651 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 FAM155BO75949 473 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 HAUS5O94927 633 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 CD9P21926 228 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 PTGER3P43115 390 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 GPR1P46091 355 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 EIF3BP55884 814 aaKnown RBP13.16□□□□□ -0.3
CNN3-203ENST00000415017 KIAA1024LP59773 190 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 YPEL5P62699 121 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 CDK3Q00526 305 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 RPL6Q02878 288 aaKnown RBP13.16□□□□□ -0.3
CNN3-203ENST00000415017 THOC5Q13769 683 aaKnown RBP13.16□□□□□ -0.3
CNN3-203ENST00000415017 INPP5AQ14642 412 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 PLK5Q496M5 336 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 KHDC1Q4VXA5 237 aaKnown RBP13.16□□□□□ -0.3
CNN3-203ENST00000415017 ZRANB3Q5FWF4 1079 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 LDLRAP1Q5SW96 308 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 RNF187Q5TA31 235 aaPredicted RBP13.16□□□□□ -0.3
CNN3-203ENST00000415017 PEAR1Q5VY43 1037 aaPredicted RBP13.16□□□□□ -0.3
CNN3-203ENST00000415017 ZNF470Q6ECI4 717 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 KYAT3Q6YP21 454 aaKnown RBP13.16□□□□□ -0.3
CNN3-203ENST00000415017 SDCCAG8Q86SQ7 713 aaPredicted RBP13.16□□□□□ -0.3
CNN3-203ENST00000415017 ZC3HC1Q86WB0 502 aaKnown RBP13.16□□□□□ -0.3
CNN3-203ENST00000415017 CNPY4Q8N129 248 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 GABPB2Q8TAK5 448 aaPredicted RBP13.16□□□□□ -0.3
CNN3-203ENST00000415017 HEXDCQ8WVB3 486 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 CDKL2Q92772 493 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 CCDC97Q96F63 343 aaPredicted RBP13.16□□□□□ -0.3
CNN3-203ENST00000415017 SCARF2Q96GP6 870 aaPredicted RBP13.16□□□□□ -0.3
CNN3-203ENST00000415017 HIC2Q96JB3 615 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 BIRC8Q96P09 236 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 PAFAH2Q99487 392 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 FAM96AQ9H5X1 160 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 PLAAQ9Y263 795 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 SLCO1B1Q9Y6L6 691 aa13.16□□□□□ -0.3
CNN3-203ENST00000415017 GOLGA8CPA6NN73 597 aa13.15□□□□□ -0.3
CNN3-203ENST00000415017 CHUKO15111 745 aa13.15□□□□□ -0.3
CNN3-203ENST00000415017 FSBPO95073 299 aa13.15□□□□□ -0.3
CNN3-203ENST00000415017 MYCLP1P12525 358 aaPredicted RBP13.15□□□□□ -0.3
CNN3-203ENST00000415017 GP5P40197 560 aa13.15□□□□□ -0.3
CNN3-203ENST00000415017 MPP1Q00013 466 aa13.15□□□□□ -0.3
CNN3-203ENST00000415017 TIAL1Q01085 375 aaKnown RBP eCLIP13.15□□□□□ -0.3
CNN3-203ENST00000415017 ZNF844Q08AG5 666 aa13.15□□□□□ -0.3
CNN3-203ENST00000415017 ZNF658BQ4V348 819 aaPredicted RBP13.15□□□□□ -0.3
CNN3-203ENST00000415017 TNFAIP8L3Q5GJ75 292 aa13.15□□□□□ -0.3
CNN3-203ENST00000415017 GRTP1Q5TC63 336 aa13.15□□□□□ -0.3
CNN3-203ENST00000415017 RAET1GQ6H3X3 334 aa13.15□□□□□ -0.3
CNN3-203ENST00000415017 ZNF549Q6P9A3 640 aa13.15□□□□□ -0.3
CNN3-203ENST00000415017 LDB1Q86U70 411 aaPredicted RBP13.15□□□□□ -0.3
CNN3-203ENST00000415017 IQCHQ86VS3 1027 aa13.15□□□□□ -0.3
CNN3-203ENST00000415017 HEATR4Q86WZ0 1026 aa13.15□□□□□ -0.3
CNN3-203ENST00000415017 RBFAQ8N0V3 343 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms