RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 PLA2G4EQ3MJ16 856 aa17.18■□□□□ 0.34
PHRF1-202ENST00000413872 CCNYL2Q5T2Q4 361 aa17.18■□□□□ 0.34
PHRF1-202ENST00000413872 CFAP206Q8IYR0 622 aa17.18■□□□□ 0.34
PHRF1-202ENST00000413872 FLCNQ8NFG4 579 aa17.18■□□□□ 0.34
PHRF1-202ENST00000413872 SAMD11Q96NU1 681 aa17.18■□□□□ 0.34
PHRF1-202ENST00000413872 MINDY3Q9H8M7 445 aa17.18■□□□□ 0.34
PHRF1-202ENST00000413872 CCNYL3P0C7X3 344 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 C4BPBP20851 252 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 TPP2P29144 1249 aaPredicted RBP17.17■□□□□ 0.34
PHRF1-202ENST00000413872 MTAPQ13126 283 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 ERICH5Q6P6B1 374 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 TMEM192Q8IY95 271 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 SH3GL3Q99963 347 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 SERHL2Q9H4I8 314 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 SERHLQ9NQF3 203 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 ATP6AP2A0A1C7CYW4 349 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 CLDN4O14493 209 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 ATP6AP2O75787 350 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 SNAI1O95863 264 aaPredicted RBP17.17■□□□□ 0.34
PHRF1-202ENST00000413872 GOT2P00505 430 aaKnown RBP17.17■□□□□ 0.34
PHRF1-202ENST00000413872 SLC25A3Q00325 362 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 TRIM16LQ309B1 348 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 MED27Q6P2C8 311 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 ZYG11AQ6WRX3 759 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 IQCKQ8N0W5 287 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 OR4A15Q8NGL6 344 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 PAPOLBQ9NRJ5 636 aaKnown RBP17.17■□□□□ 0.34
PHRF1-202ENST00000413872 MAP10Q9P2G4 905 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 LZTS1Q9Y250 596 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 PRMT3O60678 531 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 TM7SF2O76062 418 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 CDH5P33151 784 aaPredicted RBP17.17■□□□□ 0.34
PHRF1-202ENST00000413872 MAGEA11P43364 429 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 GSTM5P46439 218 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 ECT2LQ008S8 904 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 PPIDQ08752 370 aaKnown RBP17.17■□□□□ 0.34
PHRF1-202ENST00000413872 LCP2Q13094 533 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 SEMA5AQ13591 1074 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 METTL21CQ5VZV1 264 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 DHDDSQ86SQ9 333 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 ARMC8Q8IUR7 673 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 PPP1R14AQ96A00 147 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 TEPSINQ96N21 525 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 SMAD5Q99717 465 aaKnown RBP17.17■□□□□ 0.34
PHRF1-202ENST00000413872 FNDC11Q9BVV2 318 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 KIR3DL1P43629 444 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 UGT2B15P54855 530 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 TRIM71Q2Q1W2 868 aaKnown RBP17.17■□□□□ 0.34
PHRF1-202ENST00000413872 SIAH1Q8IUQ4 282 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 LCN9Q8WX39 176 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 MFSD3Q96ES6 412 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 SHDQ96IW2 340 aa17.17■□□□□ 0.34
PHRF1-202ENST00000413872 FAM25AB3EWG3 89 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 FAM25CB3EWG5 89 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 FAM25GB3EWG6 89 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 SLC10A3P09131 477 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 C9orf64Q5T6V5 341 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 NXNL1Q96CM4 212 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 TLR9Q9NR96 1032 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 RHPN2P1A8MT19 583 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 SLC35G6P0C7Q6 338 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 HSD17B2P37059 387 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 TDRPQ86YL5 185 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 TTC29Q8NA56 475 aaPredicted RBP17.16■□□□□ 0.34
PHRF1-202ENST00000413872 C7orf43Q8WVR3 580 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 C19orf60Q96EN9 201 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 RNF39Q9H2S5 420 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 IPPKQ9H8X2 491 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 SUCOQ9UBS9 1254 aaKnown RBP17.16■□□□□ 0.34
PHRF1-202ENST00000413872 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.16■□□□□ 0.34
PHRF1-202ENST00000413872 CENPXA8MT69 81 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 SUV39H1O43463 412 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 FSBPO95073 299 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 CDH3P22223 829 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 CSKP41240 450 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 RALGPS1Q5JS13 557 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 GALNT18Q6P9A2 607 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 ADAMTS15Q8TE58 950 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 METTL21AQ8WXB1 218 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 OR2AG2A6NM03 316 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 SLC28A2O43868 658 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 MT-CYBP00156 380 aaPredicted RBP17.16■□□□□ 0.34
PHRF1-202ENST00000413872 GNSP15586 552 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 DRD4P21917 467 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 AHI1Q8N157 1196 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 C19orf18Q8NEA5 215 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 RCN3Q96D15 328 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 APOLD1Q96LR9 279 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 C7orf26Q96N11 449 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 TRMT61BQ9BVS5 477 aaKnown RBP17.16■□□□□ 0.34
PHRF1-202ENST00000413872 SMOC2Q9H3U7 446 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 CLN6Q9NWW5 311 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 FKBPLQ9UIM3 349 aa17.16■□□□□ 0.34
PHRF1-202ENST00000413872 TCRBV7S2A1N4TA0A589 114 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 NRP2O60462 931 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 PIAS1O75925 651 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 HLA-DQA2P01906 255 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 TTKP33981 857 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 GSSP48637 474 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 ST13P50502 369 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms