RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 NUDT21O43809 227 aaKnown RBP14.66□□□□□ -0.06
LIMS4-201ENST00000413601 NUAK1O60285 661 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 ZNF189O75820 626 aaPredicted RBP14.66□□□□□ -0.06
LIMS4-201ENST00000413601 MPOP05164 745 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 ZNF8P17098 575 aaPredicted RBP14.66□□□□□ -0.06
LIMS4-201ENST00000413601 GDF10P55107 478 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 PEX6Q13608 980 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 LRP8Q14114 963 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 PTPRCAPQ14761 206 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 ATP13A5Q4VNC0 1218 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 PDPK2PQ6A1A2 396 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 ARHGEF18Q6ZSZ5 1173 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 ADGRG6Q86SQ4 1221 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 C17orf82Q86X59 251 aaPredicted RBP14.66□□□□□ -0.06
LIMS4-201ENST00000413601 SLC13A5Q86YT5 568 aaPredicted RBP14.66□□□□□ -0.06
LIMS4-201ENST00000413601 PHYKPLQ8IUZ5 450 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 CCNJLQ8IV13 435 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 ARL14Q8N4G2 192 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 WDR48Q8TAF3 677 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 UBE2Q2Q8WVN8 375 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 ATXN7L3BQ96GX2 97 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 ALS2CR12Q96Q35 445 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 GFM1Q96RP9 751 aaKnown RBP14.66□□□□□ -0.06
LIMS4-201ENST00000413601 CARD9Q9H257 536 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 LRRN3Q9H3W5 708 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 RMI1Q9H9A7 625 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 IL26Q9NPH9 171 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 PPP2R2CQ9Y2T4 447 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 RAXQ9Y2V3 346 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 PKP3Q9Y446 797 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 ARL5AQ9Y689 179 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 CACNA1BQ00975 2339 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 ADAMTS20P59510 1910 aa14.66□□□□□ -0.06
LIMS4-201ENST00000413601 TRBV23OR9-2A0A075B6M9 112 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 GRID2O43424 1007 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 NRDCO43847 1150 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 BRINP1O60477 761 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 MTX2O75431 263 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 METTL18O95568 372 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 EML2O95834 649 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 ACP5P13686 325 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 PNLIPP16233 465 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 SPAM1P38567 509 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 PDX1P52945 283 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 CHRNA6Q15825 494 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 PARP6Q2NL67 630 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 KHDC1Q4VXA5 237 aaKnown RBP14.65□□□□□ -0.06
LIMS4-201ENST00000413601 FAM151BQ6UXP7 276 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 SPRED1Q7Z699 444 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 TAB3Q8N5C8 712 aaPredicted RBP14.65□□□□□ -0.06
LIMS4-201ENST00000413601 C1orf54Q8WWF1 131 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 PPP1R2P1Q96PQ5 205 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 VPS35Q96QK1 796 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 TBL1YQ9BQ87 522 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 KCNK6Q9Y257 313 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 KCTD3Q9Y597 815 aa14.65□□□□□ -0.06
LIMS4-201ENST00000413601 A0A1W2PNU3 283 aaPredicted RBP14.64□□□□□ -0.07
LIMS4-201ENST00000413601 GOLGA6L3A6NEY3 463 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 RHPN2P1A8MT19 583 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 D6RAR5 112 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 CHUKO15111 745 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 PPM1DO15297 605 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 STX7O15400 261 aaKnown RBP14.64□□□□□ -0.07
LIMS4-201ENST00000413601 GPR39O43194 453 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 LIASO43766 372 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 UGT1A9O60656 530 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 UGT1A6P19224 532 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 LPOP22079 712 aaPredicted RBP14.64□□□□□ -0.07
LIMS4-201ENST00000413601 UGT1A1P22309 533 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 UGT1A4P22310 534 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 ALDH4A1P30038 563 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 UGT1A3P35503 534 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 UGT1A5P35504 534 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 OR1D5P58170 312 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 GABREP78334 506 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 B4GALNT1Q00973 533 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 MSLNQ13421 630 aaPredicted RBP14.64□□□□□ -0.07
LIMS4-201ENST00000413601 BIRC2Q13490 618 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 SNX1Q13596 522 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 TAF1AQ15573 450 aaPredicted RBP14.64□□□□□ -0.07
LIMS4-201ENST00000413601 C3orf38Q5JPI3 329 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 ZDHHC20Q5W0Z9 365 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 KCTD11Q693B1 232 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 DENND5AQ6IQ26 1287 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 CRTC3Q6UUV7 619 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 B3GNT8Q7Z7M8 397 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 KLHDC8BQ8IXV7 354 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 GDAP1Q8TB36 358 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 FOXP3Q9BZS1 431 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 UGT1A7Q9HAW7 530 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 UGT1A10Q9HAW8 530 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 UGT1A8Q9HAW9 530 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.64□□□□□ -0.07
LIMS4-201ENST00000413601 TBC1D29Q9UFV1 150 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 ATXN7L1Q9ULK2 861 aaPredicted RBP14.64□□□□□ -0.07
LIMS4-201ENST00000413601 SATB2Q9UPW6 733 aa14.64□□□□□ -0.07
LIMS4-201ENST00000413601 DMXL2Q8TDJ6 3036 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 FREM2Q5SZK8 3169 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 GLYATL1P3A0A0U1RQE8 302 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 C2orf81A6NN90 581 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms