RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 LARSQ9P2J5 1176 aaKnown RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 UBA2Q9UBT2 640 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 ZNF112Q9UJU3 913 aa4.77□□□□□ -1.65
HMGB3P31-201ENST00000413333 CGB1A6NKQ9 187 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 BECN2A8MW95 431 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 H0YIN7 160 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 SPRY1O43609 319 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 C22orf31O95567 290 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 TRUB2O95900 331 aaKnown RBP4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 CELA2AP08217 269 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 VPREB1P12018 145 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 FDPSP14324 419 aaKnown RBP4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 ERCC2P18074 760 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 BDKRB2P30411 391 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 STX2P32856 288 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 ME1P48163 572 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 RAD23BP54727 409 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 CDH13P55290 713 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 FOXM1Q08050 763 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 TNIP1Q15025 636 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 MEP1AQ16819 746 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 PRTGQ2VWP7 1150 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 ODF3L2Q3SX64 289 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 COLEC12Q5KU26 742 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 OTUD1Q5VV17 481 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 DBX2Q6ZNG2 339 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 INTS8Q75QN2 995 aaKnown RBP4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 BEST3Q8N1M1 668 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 RASGEF1CQ8N431 466 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 AADATQ8N5Z0 425 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 TSPAN14Q8NG11 270 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 HMGCLL1Q8TB92 370 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 COQ8BQ96D53 544 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 VMP1Q96GC9 406 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 LINC00615Q96LM1 132 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 NLRP4Q96MN2 994 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 ZNF830Q96NB3 372 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 RAB3IPQ96QF0 476 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 SEMA3CQ99985 751 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 RAD21L1Q9H4I0 556 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 MAGIXQ9H6Y5 334 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 OSGIN1Q9UJX0 560 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 GTF3C4Q9UKN8 822 aa4.76□□□□□ -1.65
HMGB3P31-201ENST00000413333 EDDM13A0A1B0GTR0 161 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 SPINT2O43291 252 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 IFNAR1P17181 557 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 MUTP22033 750 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 PTAFRP25105 342 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 NMBRP28336 390 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 CCR10P46092 362 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 RFX5P48382 616 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 HNF4GQ14541 408 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 EFNB3Q15768 340 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 CBWD6Q4V339 395 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 FSCBQ5H9T9 825 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 MTX3Q5HYI7 312 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 CBWD3Q5JTY5 395 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 FNBP1LQ5T0N5 605 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 ZNF626Q68DY1 528 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 TEX38Q6PEX7 206 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 KCTD18Q6PI47 426 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 DCLRE1AQ6PJP8 1040 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 CEP57Q86XR8 500 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 CFAP61Q8NHU2 1237 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 MPLKIPQ8TAP9 179 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 RHBDF1Q96CC6 855 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 ZG16BQ96DA0 208 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 LRFN5Q96NI6 719 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 HGH1Q9BTY7 390 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 TMEM39BQ9GZU3 492 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 PPIL3Q9H2H8 161 aaKnown RBP4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 OLAHQ9NV23 265 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 TSPYL4Q9UJ04 414 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 TUBE1Q9UJT0 475 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 ACSL5Q9ULC5 683 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 B3GALT5Q9Y2C3 310 aa4.75□□□□□ -1.65
HMGB3P31-201ENST00000413333 IGLV5-39A0A0G2JS06 123 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 RPS10-NUDT3A0A1W2PQS6 291 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 hDV102S1A0JD36 115 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 TMEM8BA6NDV4 472 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 VWA5AO00534 786 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 HS3ST1O14792 307 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 WNT9BO14905 357 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 ASAP2O43150 1006 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 FGBP02675 491 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 FYNP06241 537 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 PRF1P14222 555 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 PFKFB1P16118 471 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 RAB28P51157 221 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 KRT83P78385 493 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 RBP5P82980 135 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 DDR1Q08345 913 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 BFSP1Q12934 665 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 RABEP1Q15276 862 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 EZH2Q15910 746 aaKnown RBP4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 ASIC2Q16515 512 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 MYLK3Q32MK0 819 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 RBPMS2Q6ZRY4 209 aaKnown RBP4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 MFSD6Q6ZSS7 791 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 PIP4P1Q86T03 277 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms