RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ZNF599Q96NL3 588 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 NEURL2Q9BR09 285 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 LRRC3Q9BY71 257 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 NANOGQ9H9S0 305 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 ZIM2Q9NZV7 527 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 ITGB1BP2Q9UKP3 347 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 CRYL1Q9Y2S2 319 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 PCDHB3Q9Y5E6 796 aa17.52■□□□□ 0.4
SDCBP-202ENST00000413219 C16orf96A6NNT2 1141 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 ADM5C9JUS6 153 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 H3BMM5 538 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 LDB2O43679 373 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 CRCPO75575 148 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 SLC22A3O75751 556 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 GLP2RO95838 553 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 MMP2P08253 660 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 CDH3P22223 829 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 GSTM4Q03013 218 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 SKIV2LQ15477 1246 aaKnown RBP17.52■□□□□ 0.39
SDCBP-202ENST00000413219 XKR7Q5GH72 579 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 ANKS6Q68DC2 871 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 FAM171BQ6P995 826 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 FKBP9P1Q75LS8 142 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 CHST15Q7LFX5 561 aaPredicted RBP17.52■□□□□ 0.39
SDCBP-202ENST00000413219 THAP5Q7Z6K1 395 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 UMODL1-AS1Q8N2C9 162 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 HDAC2Q92769 488 aaKnown RBP17.52■□□□□ 0.39
SDCBP-202ENST00000413219 KIAA1191Q96A73 305 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 VPS33AQ96AX1 596 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 NSMCE2Q96MF7 247 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 TRIM8Q9BZR9 551 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 ING2Q9H160 280 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 NOL6Q9H6R4 1146 aaKnown RBP17.52■□□□□ 0.39
SDCBP-202ENST00000413219 NTN4Q9HB63 628 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 HPS4Q9NQG7 708 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 INIPQ9NRY2 104 aa17.52■□□□□ 0.39
SDCBP-202ENST00000413219 FAM234BA2RU67 622 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 UPK1AO00322 258 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 ALPLP05186 524 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 THRBP10828 461 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 ELK4P28324 431 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 EEF1DP29692 281 aaKnown RBP17.51■□□□□ 0.39
SDCBP-202ENST00000413219 POLR2JP52435 117 aaKnown RBP17.51■□□□□ 0.39
SDCBP-202ENST00000413219 SIRPB2Q5JXA9 342 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 MARC1Q5VT66 337 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 GALNT18Q6P9A2 607 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 STAG3L4Q8TBR4 150 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 ISG20Q96AZ6 181 aaKnown RBP17.51■□□□□ 0.39
SDCBP-202ENST00000413219 DCPSQ96C86 337 aaKnown RBP17.51■□□□□ 0.39
SDCBP-202ENST00000413219 AURKBQ96GD4 344 aaPredicted RBP17.51■□□□□ 0.39
SDCBP-202ENST00000413219 RNF145Q96MT1 663 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 TMEM209Q96SK2 561 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 SEPHS2Q99611 448 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 C1QTNF3Q9BXJ4 246 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 RAD21L1Q9H4I0 556 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 SUN2Q9UH99 717 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 OR51F1A6NGY5 319 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 J3QRK9 145 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 CD3EAPO15446 510 aaKnown RBP17.51■□□□□ 0.39
SDCBP-202ENST00000413219 DNAJB5O75953 348 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 CHEK2O96017 543 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 C1RP00736 705 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 ALDH2P05091 517 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 RPS17P08708 135 aaKnown RBP17.51■□□□□ 0.39
SDCBP-202ENST00000413219 OGNP20774 298 aaKnown RBP17.51■□□□□ 0.39
SDCBP-202ENST00000413219 CRHBPP24387 322 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 SHMT2P34897 504 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 GABARAPL2P60520 117 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 ATP1A4Q13733 1029 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 FUT11Q495W5 492 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 TTC23Q5W5X9 447 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 HID1Q8IV36 788 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 FBXO39Q8N4B4 442 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 DPP10Q8N608 796 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 FBXL8Q96CD0 374 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 TEX37Q96LM6 180 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 C1orf74Q96LT6 269 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 RTP3Q9BQQ7 232 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 AARSD1Q9BTE6 412 aaKnown RBP17.51■□□□□ 0.39
SDCBP-202ENST00000413219 DERL2Q9GZP9 239 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 LHPPQ9H008 270 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 SYTL2Q9HCH5 934 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 CORINQ9Y5Q5 1042 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 HS3ST4Q9Y661 456 aa17.51■□□□□ 0.39
SDCBP-202ENST00000413219 MIA3Q5JRA6 1907 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 LOC285095A0A1B0GVY8 99 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 TTC36A6NLP5 189 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 CCL22O00626 93 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 KPNA4O00629 521 aaPredicted RBP17.5■□□□□ 0.39
SDCBP-202ENST00000413219 UROSP10746 265 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 CLCNKBP51801 687 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 ERVK-8P63133 956 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 ITKQ08881 620 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 EPS8Q12929 822 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 PYCR3Q53H96 274 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 GLYATQ6IB77 296 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 C8orf59Q8N0T1 100 aaPredicted RBP17.5■□□□□ 0.39
SDCBP-202ENST00000413219 TEX26Q8N6G2 289 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 ZC3H15Q8WU90 426 aaKnown RBP17.5■□□□□ 0.39
SDCBP-202ENST00000413219 PABPC5Q96DU9 382 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms