RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 CDC14AQ9UNH5 594 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 SMIM28A0A1B0GU29 152 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 ORC5O43913 435 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 OR2B3O76000 313 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 PRKD1Q15139 912 aaPredicted RBP8.47□□□□□ -1.05
PBRM1-209ENST00000412587 PSMD5Q16401 504 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 RBM48Q5RL73 367 aaKnown RBP8.47□□□□□ -1.05
PBRM1-209ENST00000412587 TYW3Q6IPR3 259 aaKnown RBP8.47□□□□□ -1.05
PBRM1-209ENST00000412587 OOSP2Q86WS3 158 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 SPAG16Q8N0X2 631 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 C12orf29Q8N999 325 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 PTCD2Q8WV60 388 aaKnown RBP8.47□□□□□ -1.05
PBRM1-209ENST00000412587 ELMO1Q92556 727 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 MED28Q9H204 178 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 LRRC4CQ9HCJ2 640 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 BRD7Q9NPI1 651 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 TMLHEQ9NVH6 421 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 NCKIPSDQ9NZQ3 722 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 MSRAQ9UJ68 235 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 PADI3Q9ULW8 664 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 AFDNP55196 1824 aaKnown RBP8.47□□□□□ -1.05
PBRM1-209ENST00000412587 H3BMM5 538 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 PLK4O00444 970 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 POLR1CO15160 346 aaPredicted RBP8.47□□□□□ -1.05
PBRM1-209ENST00000412587 ATG7O95352 703 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 IGSF6O95976 241 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 ADH1AP07327 375 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 COL6A2P12110 1019 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 SELPP16109 830 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 ARL2P36404 184 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 DDX39BQ13838 428 aaKnown RBP8.47□□□□□ -1.05
PBRM1-209ENST00000412587 C1DQ13901 141 aaKnown RBP8.47□□□□□ -1.05
PBRM1-209ENST00000412587 KCTD19Q17RG1 926 aaPredicted RBP8.47□□□□□ -1.05
PBRM1-209ENST00000412587 C9orf57Q5W0N0 161 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 SHQ1Q6PI26 577 aaKnown RBP8.47□□□□□ -1.05
PBRM1-209ENST00000412587 ZNF773Q6PK81 442 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 ADGRD1Q6QNK2 874 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 CCBE1Q6UXH8 406 aaPredicted RBP8.47□□□□□ -1.05
PBRM1-209ENST00000412587 SLC24A5Q71RS6 500 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 POLNQ7Z5Q5 900 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 PARP8Q8N3A8 854 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 BRI3BPQ8WY22 251 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 MARK4Q96L34 752 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 PKP2Q99959 881 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 ST6GALNAC4Q9H4F1 302 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 PLLPQ9Y342 182 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 LTBP3Q9NS15 1303 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 NID2Q14112 1375 aa8.47□□□□□ -1.05
PBRM1-209ENST00000412587 NT5C1B-RDH14C9J2C7 533 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 H3BMQ9 156 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 KPNA3O00505 521 aaPredicted RBP8.46□□□□□ -1.05
PBRM1-209ENST00000412587 PAPSS1O43252 624 aaPredicted RBP8.46□□□□□ -1.05
PBRM1-209ENST00000412587 AP1G1O43747 822 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 PCDH8O95206 1070 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 RBP1P09455 135 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 IMPDH1P20839 514 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 NPY2RP49146 381 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 CREMQ03060 361 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 COL19A1Q14993 1142 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 NCF4Q15080 339 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 SLC51BQ86UW2 128 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 ZNF276Q8N554 614 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 ZNF557Q8N988 423 aaPredicted RBP8.46□□□□□ -1.05
PBRM1-209ENST00000412587 NPLOC4Q8TAT6 608 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 SEC14L1Q92503 715 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 LPGAT1Q92604 370 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 COG8Q96MW5 612 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 MECRQ9BV79 373 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 SNRNP25Q9BV90 132 aaKnown RBP8.46□□□□□ -1.05
PBRM1-209ENST00000412587 TEX12Q9BXU0 123 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 ASAH2Q9NR71 780 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 CCDC167Q9P0B6 97 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 DNMT3LQ9UJW3 386 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 CNOT11Q9UKZ1 510 aaKnown RBP8.46□□□□□ -1.05
PBRM1-209ENST00000412587 RAD54BQ9Y620 910 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 OR6C75A6NL08 312 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 C5orf58C9J3I9 102 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 HDAC3O15379 428 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 FGF10O15520 208 aaPredicted RBP8.46□□□□□ -1.05
PBRM1-209ENST00000412587 ADAM23O75077 832 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 IGFBP4P22692 258 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 MGAT1P26572 445 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 ECHS1P30084 290 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 SLC7A1P30825 629 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 PTPN9P43378 593 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 GABRB2P47870 512 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 ZNF45Q02386 682 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 HSF2Q03933 536 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 FSTL1Q12841 308 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 FRG1Q14331 258 aaKnown RBP8.46□□□□□ -1.05
PBRM1-209ENST00000412587 GALEQ14376 348 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 C16orf59Q7L2K0 433 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 FAM35AQ86V20 835 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 TIGD4Q8IY51 512 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 ADAMTS16Q8TE57 1224 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 TCEAL3Q969E4 200 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 MYDGFQ969H8 173 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 TMIGD2Q96BF3 282 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 SPOCK3Q9BQ16 436 aa8.46□□□□□ -1.05
PBRM1-209ENST00000412587 GLS2Q9UI32 602 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms