RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 ZNF8P17098 575 aaPredicted RBP18.65■□□□□ 0.58
TRIM56-202ENST00000412507 CCL7P80098 99 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 PTPRCAPQ14761 206 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 ATP13A5Q4VNC0 1218 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 RBM44Q6ZP01 1051 aaKnown RBP18.65■□□□□ 0.58
TRIM56-202ENST00000412507 ADGRG6Q86SQ4 1221 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 PROSER1Q86XN7 944 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 NAGSQ8N159 534 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 Q8N9G6 341 aaPredicted RBP18.65■□□□□ 0.58
TRIM56-202ENST00000412507 C1orf54Q8WWF1 131 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 PPP1R2P1Q96PQ5 205 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 TBL1YQ9BQ87 522 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 NRSN2Q9GZP1 204 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 CARD9Q9H257 536 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 RMI1Q9H9A7 625 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 TRIM39Q9HCM9 518 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 IL26Q9NPH9 171 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 LRIT1Q9P2V4 623 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 TMPRSS11EQ9UL52 423 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 PKD1L2Q7Z442 2459 aa18.64■□□□□ 0.58
TRIM56-202ENST00000412507 SRRM3A6NNA2 597 aaPredicted RBP18.64■□□□□ 0.57
TRIM56-202ENST00000412507 NTN3O00634 580 aaPredicted RBP18.64■□□□□ 0.57
TRIM56-202ENST00000412507 GRID2O43424 1007 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 LIASO43766 372 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 MTX2O75431 263 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 TCEA3O75764 348 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 METTL18O95568 372 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 RPLP0P05388 317 aaKnown RBP18.64■□□□□ 0.57
TRIM56-202ENST00000412507 SPAM1P38567 509 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 PEX6Q13608 980 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 LRP8Q14114 963 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 SPIDRQ14159 915 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 ISXQ2M1V0 245 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 PARP6Q2NL67 630 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 FAM151BQ6UXP7 276 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 C17orf82Q86X59 251 aaPredicted RBP18.64■□□□□ 0.57
TRIM56-202ENST00000412507 PHYKPLQ8IUZ5 450 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 KLHDC8BQ8IXV7 354 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 ARL14Q8N4G2 192 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 TAB3Q8N5C8 712 aaPredicted RBP18.64■□□□□ 0.57
TRIM56-202ENST00000412507 TRIM58Q8NG06 486 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 WDR48Q8TAF3 677 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 TLR10Q9BXR5 811 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 DKK4Q9UBT3 224 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 APPL1Q9UKG1 709 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 PKP3Q9Y446 797 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 ARL5AQ9Y689 179 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 ADAMTS20P59510 1910 aa18.64■□□□□ 0.57
TRIM56-202ENST00000412507 A0A1W2PQM1 296 aa18.63■□□□□ 0.57
TRIM56-202ENST00000412507 STX7O15400 261 aaKnown RBP18.63■□□□□ 0.57
TRIM56-202ENST00000412507 NUDT21O43809 227 aaKnown RBP18.63■□□□□ 0.57
TRIM56-202ENST00000412507 ACP5P13686 325 aa18.63■□□□□ 0.57
TRIM56-202ENST00000412507 MSLNQ13421 630 aaPredicted RBP18.63■□□□□ 0.57
TRIM56-202ENST00000412507 RTP5Q14D33 572 aa18.63■□□□□ 0.57
TRIM56-202ENST00000412507 OASLQ15646 514 aaKnown RBP18.63■□□□□ 0.57
TRIM56-202ENST00000412507 CHRNA6Q15825 494 aa18.63■□□□□ 0.57
TRIM56-202ENST00000412507 KHDC1Q4VXA5 237 aaKnown RBP18.63■□□□□ 0.57
TRIM56-202ENST00000412507 ZDHHC20Q5W0Z9 365 aa18.63■□□□□ 0.57
TRIM56-202ENST00000412507 DENND5AQ6IQ26 1287 aa18.63■□□□□ 0.57
TRIM56-202ENST00000412507 CCNJLQ8IV13 435 aa18.63■□□□□ 0.57
TRIM56-202ENST00000412507 VPS35Q96QK1 796 aa18.63■□□□□ 0.57
TRIM56-202ENST00000412507 GFM1Q96RP9 751 aaKnown RBP18.63■□□□□ 0.57
TRIM56-202ENST00000412507 FRMD8P1Q9BZ68 369 aaPredicted RBP18.63■□□□□ 0.57
TRIM56-202ENST00000412507 LRRN3Q9H3W5 708 aa18.63■□□□□ 0.57
TRIM56-202ENST00000412507 KCNK6Q9Y257 313 aa18.63■□□□□ 0.57
TRIM56-202ENST00000412507 KCTD3Q9Y597 815 aa18.63■□□□□ 0.57
TRIM56-202ENST00000412507 ENTPD2Q9Y5L3 495 aa18.63■□□□□ 0.57
TRIM56-202ENST00000412507 TRBV23OR9-2A0A075B6M9 112 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 GLYATL1P3A0A0U1RQE8 302 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 C2orf81A6NN90 581 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 GPR39O43194 453 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 UGT1A9O60656 530 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 EML2O95834 649 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 PNLIPP16233 465 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 UGT1A6P19224 532 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 LPOP22079 712 aaPredicted RBP18.62■□□□□ 0.57
TRIM56-202ENST00000412507 UGT1A1P22309 533 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 UGT1A4P22310 534 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 CA5AP35218 305 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 UGT1A3P35503 534 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 UGT1A5P35504 534 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 SNX1Q13596 522 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 TAF1AQ15573 450 aaPredicted RBP18.62■□□□□ 0.57
TRIM56-202ENST00000412507 KCTD11Q693B1 232 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 SPRED1Q7Z699 444 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 OR4K2Q8NGD2 314 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 GDAP1Q8TB36 358 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 DTX3LQ8TDB6 740 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 LRRC45Q96CN5 670 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 RTP4Q96DX8 246 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 ATXN7L3BQ96GX2 97 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 UGT1A7Q9HAW7 530 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 UGT1A10Q9HAW8 530 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 UGT1A8Q9HAW9 530 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.62■□□□□ 0.57
TRIM56-202ENST00000412507 ATXN7L1Q9ULK2 861 aaPredicted RBP18.62■□□□□ 0.57
TRIM56-202ENST00000412507 ZNF148Q9UQR1 794 aa18.62■□□□□ 0.57
TRIM56-202ENST00000412507 RHPN2P1A8MT19 583 aa18.61■□□□□ 0.57
TRIM56-202ENST00000412507 GAPDHSO14556 408 aaPredicted RBP18.61■□□□□ 0.57
TRIM56-202ENST00000412507 CHUKO15111 745 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms