RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CHST15Q7LFX5 561 aaPredicted RBP17.53■□□□□ 0.4
LSM5-204ENST00000409909 TTC30BQ8N4P2 665 aa17.53■□□□□ 0.4
LSM5-204ENST00000409909 TRAM1L1Q8N609 369 aa17.53■□□□□ 0.4
LSM5-204ENST00000409909 IPMKQ8NFU5 416 aa17.53■□□□□ 0.4
LSM5-204ENST00000409909 SRPK1Q96SB4 655 aaKnown RBP17.53■□□□□ 0.4
LSM5-204ENST00000409909 OR2AG1Q9H205 316 aa17.53■□□□□ 0.4
LSM5-204ENST00000409909 RMI1Q9H9A7 625 aa17.53■□□□□ 0.4
LSM5-204ENST00000409909 RAD18Q9NS91 495 aa17.53■□□□□ 0.4
LSM5-204ENST00000409909 RSPH14Q9UHP6 348 aa17.53■□□□□ 0.4
LSM5-204ENST00000409909 TMPRSS11EQ9UL52 423 aa17.53■□□□□ 0.4
LSM5-204ENST00000409909 PACSIN2Q9UNF0 486 aaPredicted RBP17.53■□□□□ 0.4
LSM5-204ENST00000409909 ADGRG1Q9Y653 693 aa17.53■□□□□ 0.4
LSM5-204ENST00000409909 TRBV23OR9-2A0A075B6M9 112 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 CDRT15L2A8MXV6 281 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 TNFSF15O95150 251 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 SLC25A14O95258 325 aaPredicted RBP17.52■□□□□ 0.4
LSM5-204ENST00000409909 ZNF8P17098 575 aaPredicted RBP17.52■□□□□ 0.4
LSM5-204ENST00000409909 CD1CP29017 333 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 RBMS1P29558 406 aaKnown RBP17.52■□□□□ 0.4
LSM5-204ENST00000409909 ALDH4A1P30038 563 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 CCKBRP32239 447 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 HMGCLP35914 325 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 PCBP4P57723 403 aaKnown RBP17.52■□□□□ 0.4
LSM5-204ENST00000409909 EIF3EP60228 445 aaKnown RBP17.52■□□□□ 0.4
LSM5-204ENST00000409909 KIF5AQ12840 1032 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 MPP3Q13368 585 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 PEX6Q13608 980 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 SLC1A5Q15758 541 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 AMZ1Q400G9 498 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 ZNF569Q5MCW4 686 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 LRRC69Q6ZNQ3 347 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 ADGRG6Q86SQ4 1221 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 SLITRK4Q8IW52 837 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 GLYATL1Q969I3 302 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 NAF1Q96HR8 494 aaKnown RBP17.52■□□□□ 0.4
LSM5-204ENST00000409909 TMEM74Q96NL1 305 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 GBA3Q9H227 469 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 CARD9Q9H257 536 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 SEMA6CQ9H3T2 930 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 RDH14Q9HBH5 336 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 TRIM39Q9HCM9 518 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 THSD1Q9NS62 852 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 TBC1D29Q9UFV1 150 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 AMFRQ9UKV5 643 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 KCNK6Q9Y257 313 aa17.52■□□□□ 0.4
LSM5-204ENST00000409909 TMX2-CTNND1H3BSU7 103 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 PLD2O14939 933 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 DDX3YO15523 660 aaKnown RBP17.51■□□□□ 0.39
LSM5-204ENST00000409909 GRID2O43424 1007 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 FTCDO95954 541 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 AGTP01019 485 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 RBP3P10745 1247 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 ACP5P13686 325 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 HGFP14210 728 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 GPR3P46089 330 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 TLE3Q04726 772 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 ATMQ13315 3056 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 KHDC1Q4VXA5 237 aaKnown RBP17.51■□□□□ 0.39
LSM5-204ENST00000409909 PDPK2PQ6A1A2 396 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 ZNF574Q6ZN55 896 aaPredicted RBP17.51■□□□□ 0.39
LSM5-204ENST00000409909 USP53Q70EK8 1073 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 RAB11FIP2Q7L804 512 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 PEX26Q7Z412 305 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 SPACA3Q8IXA5 215 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 SFRP1Q8N474 314 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 ZNF248Q8NDW4 579 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 SLC37A2Q8TED4 501 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 PLEKHG4BQ96PX9 1271 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 STRADBQ9C0K7 418 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 TRABDQ9H4I3 376 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 IL26Q9NPH9 171 aa17.51■□□□□ 0.39
LSM5-204ENST00000409909 A6NCN8 305 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 AGRPO00253 132 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 CHUKO15111 745 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 MTX2O75431 263 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 TJP3O95049 919 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 HLA-DPA1P20036 260 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 UGT1A5P35504 534 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 ATP13A5Q4VNC0 1218 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 ANKRD20A2Q5SQ80 823 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 ANKRD20A1Q5TYW2 823 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 ANKRD20A3Q5VUR7 823 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 NKAIN2Q5VXU1 208 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 IYDQ6PHW0 289 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 DARS2Q6PI48 645 aaKnown RBP17.5■□□□□ 0.39
LSM5-204ENST00000409909 CDKL3Q8IVW4 592 aaPredicted RBP17.5■□□□□ 0.39
LSM5-204ENST00000409909 FBXO39Q8N4B4 442 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 BLOC1S5Q8TDH9 187 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 NUDT22Q9BRQ3 303 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 IL17CQ9P0M4 197 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 SLC23A2Q9UGH3 650 aa17.5■□□□□ 0.39
LSM5-204ENST00000409909 KCNN4O15554 427 aa17.49■□□□□ 0.39
LSM5-204ENST00000409909 BUD23O43709 281 aaKnown RBP17.49■□□□□ 0.39
LSM5-204ENST00000409909 KALRNO60229 2985 aa17.49■□□□□ 0.39
LSM5-204ENST00000409909 ANXA9O76027 345 aa17.49■□□□□ 0.39
LSM5-204ENST00000409909 CPNE6O95741 557 aa17.49■□□□□ 0.39
LSM5-204ENST00000409909 ITGA2BP08514 1039 aa17.49■□□□□ 0.39
LSM5-204ENST00000409909 HOXB3P14651 431 aaPredicted RBP17.49■□□□□ 0.39
LSM5-204ENST00000409909 PSMB4P28070 264 aa17.49■□□□□ 0.39
LSM5-204ENST00000409909 CA5AP35218 305 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms