RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 C6orf163Q5TEZ5 329 aa7.46□□□□□ -1.22
CXCR4-202ENST00000409817 UGT3A1Q6NUS8 523 aa7.46□□□□□ -1.22
CXCR4-202ENST00000409817 ATG14Q6ZNE5 492 aa7.46□□□□□ -1.22
CXCR4-202ENST00000409817 ISCA2Q86U28 154 aa7.46□□□□□ -1.22
CXCR4-202ENST00000409817 TTC30BQ8N4P2 665 aa7.46□□□□□ -1.22
CXCR4-202ENST00000409817 NKAPQ8N5F7 415 aaKnown RBP7.46□□□□□ -1.22
CXCR4-202ENST00000409817 MAB21L3Q8N8X9 362 aa7.46□□□□□ -1.22
CXCR4-202ENST00000409817 TXNDC5Q8NBS9 432 aaKnown RBP7.46□□□□□ -1.22
CXCR4-202ENST00000409817 MDGA1Q8NFP4 955 aa7.46□□□□□ -1.22
CXCR4-202ENST00000409817 ISG20Q96AZ6 181 aaKnown RBP7.46□□□□□ -1.22
CXCR4-202ENST00000409817 PRR11Q96HE9 360 aaPredicted RBP7.46□□□□□ -1.22
CXCR4-202ENST00000409817 EXOC2Q96KP1 924 aa7.46□□□□□ -1.22
CXCR4-202ENST00000409817 ANKRD27Q96NW4 1050 aa7.46□□□□□ -1.22
CXCR4-202ENST00000409817 TTC1Q99614 292 aa7.46□□□□□ -1.22
CXCR4-202ENST00000409817 DERL2Q9GZP9 239 aa7.46□□□□□ -1.22
CXCR4-202ENST00000409817 SUDS3Q9H7L9 328 aaPredicted RBP7.46□□□□□ -1.22
CXCR4-202ENST00000409817 ABCB8Q9NUT2 735 aa7.46□□□□□ -1.22
CXCR4-202ENST00000409817 CFAP97Q9P2B7 532 aa7.46□□□□□ -1.22
CXCR4-202ENST00000409817 DPP7Q9UHL4 492 aa7.46□□□□□ -1.22
CXCR4-202ENST00000409817 CDYLQ9Y232 598 aa7.46□□□□□ -1.22
CXCR4-202ENST00000409817 CRYL1Q9Y2S2 319 aa7.46□□□□□ -1.22
CXCR4-202ENST00000409817 ACTL7AQ9Y615 435 aa7.46□□□□□ -1.22
CXCR4-202ENST00000409817 ANKRD36A6QL64 1941 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 PTPRSQ13332 1948 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 A0A1W2PQ67 120 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 LCHNA4D1U4 455 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 OR51F1A6NGY5 319 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 SYCE1LA8MT33 242 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 LEFTY2O00292 366 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 HTRA2O43464 458 aaPredicted RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 VPS26AO75436 327 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 IGSF6O95976 241 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 ESR1P03372 595 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 CHRNGP07510 517 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 PDHA1P08559 390 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 POU2F2P09086 479 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 PIRTP0C851 137 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 CD1DP15813 335 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 PGM1P36871 562 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 BMPR1AP36894 532 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 PTGER3P43115 390 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 IRX1P78414 480 aaPredicted RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 ZXDBP98169 803 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 CYP4F8P98187 520 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 FPGSQ05932 587 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 CACNG1Q06432 222 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 SULT2A1Q06520 285 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 RAD51Q06609 339 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 BCL2L1Q07817 233 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 DMC1Q14565 340 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 PLEKHG6Q3KR16 790 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 ARHGAP15Q53QZ3 475 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 GPR158Q5T848 1215 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 ZNF549Q6P9A3 640 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 LINGO4Q6UY18 593 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 RINLQ6ZS11 566 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 FRMD7Q6ZUT3 714 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 LSMEM2Q8N112 164 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 CPSF7Q8N684 471 aaKnown RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 CCNYL1Q8N7R7 359 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 KIAA1958Q8N8K9 716 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 ENDOVQ8N8Q3 282 aaKnown RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 MRPL43Q8N983 215 aaKnown RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 KDM1BQ8NB78 822 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 RBM15BQ8NDT2 890 aaKnown RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 STAG3L4Q8TBR4 150 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 KCNJ9Q92806 393 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 MAELQ96JY0 434 aaKnown RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 NSMCE3Q96MG7 304 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 HHIPQ96QV1 700 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 TUBGCP5Q96RT8 1024 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 TCF25Q9BQ70 676 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 ATP13A3Q9H7F0 1226 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 DCLRE1BQ9H816 532 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 RNPEPL1Q9HAU8 725 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 IL17CQ9P0M4 197 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 PCDHB1Q9Y5F3 818 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 OAS3Q9Y6K5 1087 aaKnown RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 CEP350Q5VT06 3117 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 UBA6A0AVT1 1052 aaPredicted RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 CCL22O00626 93 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 GRID2O43424 1007 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 KERAO60938 352 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 TM7SF2O76062 418 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 SRP72O76094 671 aaKnown RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 RHOBTB1O94844 696 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 HNRNPA1P09651 372 aaKnown RBP eCLIP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 SPATA31D3P0C874 917 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 THRAP10827 490 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 PKMP14618 531 aaKnown RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 PTPN2P17706 415 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 NCF2P19878 526 aaPredicted RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 SP100P23497 879 aaPredicted RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 MC4RP32245 332 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 SNRPD1P62314 119 aaKnown RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 HERVK_113P63132 956 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 KDSRQ06136 332 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 SEMA3AQ14563 771 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 NAA25Q14CX7 972 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 HERC3Q15034 1050 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms