RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 DNAJC3Q13217 504 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 POU6F1Q14863 301 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 PPP1R7Q15435 360 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 TCEA2Q15560 299 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 TPSAB1Q15661 275 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 ATP13A5Q4VNC0 1218 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 PYCR3Q53H96 274 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 CCDC157Q569K6 752 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 MARK2Q7KZI7 788 aaKnown RBP10.8□□□□□ -0.68
CHMP3-205ENST00000409810 PRUNE1Q86TP1 453 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 GALNT15Q8N3T1 639 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 GLIS1Q8NBF1 620 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 FAM46DQ8NEK8 389 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 OR6C4Q8NGE1 309 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 OR52K1Q8NGK4 314 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 GPBAR1Q8TDU6 330 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 NAT6Q93015 286 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 ULK4Q96C45 1275 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 CAPZA3Q96KX2 299 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 OR2AG1Q9H205 316 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 IL26Q9NPH9 171 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 TOR4AQ9NXH8 423 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 SMARCAL1Q9NZC9 954 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 ATXN10Q9UBB4 475 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 ZNHIT2Q9UHR6 403 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 SLC30A1Q9Y6M5 507 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 UNC13CQ8NB66 2214 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 SPEGQ15772 3267 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 GRID2O43424 1007 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 LDB2O43679 373 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 NUAK1O60285 661 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 SRP72O76094 671 aaKnown RBP10.79□□□□□ -0.68
CHMP3-205ENST00000409810 DKK1O94907 266 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 RALBP11234 206 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 TPH1P17752 444 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 CASQ1P31415 396 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 ACTR1BP42025 376 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 VPS41P49754 854 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 ACTR1AP61163 376 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 CTBSQ01459 385 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 GPS1Q13098 491 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 MSLNQ13421 630 aaPredicted RBP10.79□□□□□ -0.68
CHMP3-205ENST00000409810 NFATC2Q13469 925 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 CHRNA6Q15825 494 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 SKIDA1Q1XH10 827 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 KCTD16Q68DU8 428 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 TTC27Q6P3X3 843 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 NYAP1Q6ZVC0 841 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 NLRP9Q7RTR0 991 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 SNX20Q7Z614 316 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 RAB44Q7Z6P3 723 aaPredicted RBP10.79□□□□□ -0.68
CHMP3-205ENST00000409810 SLCO6A1Q86UG4 719 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 LRRTM4Q86VH4 590 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 PNPLA1Q8N8W4 532 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 DDHD1Q8NEL9 900 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 PPHLN1Q8NEY8 458 aaKnown RBP10.79□□□□□ -0.68
CHMP3-205ENST00000409810 OR13C4Q8NGS5 318 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 IFI44Q8TCB0 444 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 ZNF398Q8TD17 642 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 HEXDCQ8WVB3 486 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 PEX13Q92968 403 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 TRIM44Q96DX7 344 aaPredicted RBP10.79□□□□□ -0.68
CHMP3-205ENST00000409810 RANBP9Q96S59 729 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 DPEP2Q9H4A9 486 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 ASB8Q9H765 288 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 CAAP1Q9H8G2 361 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 CASS4Q9NQ75 786 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 NLE1Q9NVX2 485 aaPredicted RBP10.79□□□□□ -0.68
CHMP3-205ENST00000409810 PIH1D1Q9NWS0 290 aaKnown RBP10.79□□□□□ -0.68
CHMP3-205ENST00000409810 TAAR2Q9P1P5 351 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 SIRPGQ9P1W8 387 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 GULP1Q9UBP9 304 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 FKBPLQ9UIM3 349 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 CRLS1Q9UJA2 301 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 ANGPTL2Q9UKU9 493 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 OAS3Q9Y6K5 1087 aaKnown RBP10.79□□□□□ -0.68
CHMP3-205ENST00000409810 NCOR2Q9Y618 2525 aa10.79□□□□□ -0.68
CHMP3-205ENST00000409810 CPED1A4D0V7 1026 aa10.78□□□□□ -0.68
CHMP3-205ENST00000409810 EME2A4GXA9 379 aaPredicted RBP10.78□□□□□ -0.68
CHMP3-205ENST00000409810 MROH6A6NGR9 719 aa10.78□□□□□ -0.68
CHMP3-205ENST00000409810 B4DGG1 531 aa10.78□□□□□ -0.68
CHMP3-205ENST00000409810 CFAP99D6REC4 459 aa10.78□□□□□ -0.68
CHMP3-205ENST00000409810 H7C0S8 307 aa10.78□□□□□ -0.68
CHMP3-205ENST00000409810 CCDC188H7C350 402 aa10.78□□□□□ -0.68
CHMP3-205ENST00000409810 KMOO15229 486 aa10.78□□□□□ -0.68
CHMP3-205ENST00000409810 ZW10O43264 779 aa10.78□□□□□ -0.68
CHMP3-205ENST00000409810 CDK14O94921 469 aa10.78□□□□□ -0.68
CHMP3-205ENST00000409810 SLC2A4P14672 509 aa10.78□□□□□ -0.68
CHMP3-205ENST00000409810 ZNF8P17098 575 aaPredicted RBP10.78□□□□□ -0.68
CHMP3-205ENST00000409810 VCLP18206 1134 aa10.78□□□□□ -0.68
CHMP3-205ENST00000409810 MSH3P20585 1137 aa10.78□□□□□ -0.68
CHMP3-205ENST00000409810 ADRA1DP25100 572 aa10.78□□□□□ -0.68
CHMP3-205ENST00000409810 AK4P27144 223 aaPredicted RBP10.78□□□□□ -0.68
CHMP3-205ENST00000409810 AKT1P31749 480 aa10.78□□□□□ -0.68
CHMP3-205ENST00000409810 MC4RP32245 332 aa10.78□□□□□ -0.68
CHMP3-205ENST00000409810 ETF1P62495 437 aaKnown RBP10.78□□□□□ -0.68
CHMP3-205ENST00000409810 TMPRSS15P98073 1019 aa10.78□□□□□ -0.68
CHMP3-205ENST00000409810 SHC2P98077 582 aa10.78□□□□□ -0.68
CHMP3-205ENST00000409810 TMEM115Q12893 351 aaPredicted RBP10.78□□□□□ -0.68
CHMP3-205ENST00000409810 BIRC2Q13490 618 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms