RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 ERRFI1Q9UJM3 462 aaPredicted RBP16.48■□□□□ 0.23
CHMP3-203ENST00000409225 PCDHGA9Q9Y5G4 932 aaKnown RBP16.48■□□□□ 0.23
CHMP3-203ENST00000409225 DOPEY1Q5JWR5 2465 aa16.48■□□□□ 0.23
CHMP3-203ENST00000409225 C21orf140B9A014 251 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 KIF1CO43896 1103 aaKnown RBP16.47■□□□□ 0.23
CHMP3-203ENST00000409225 UBXN7O94888 489 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 PEX11BO96011 259 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 MT-ND3P03897 115 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 PDHA1P08559 390 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 FGF5P12034 268 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 AMD1P17707 334 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 JAM2P57087 298 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 UBE2IP63279 158 aaKnown RBP16.47■□□□□ 0.23
CHMP3-203ENST00000409225 SYCP1Q15431 976 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 UGT8Q16880 541 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 ERMARDQ5T6L9 678 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 PPP1R3BQ86XI6 285 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 PIH1D2Q8WWB5 315 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 PHF12Q96QT6 1004 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 MGME1Q9BQP7 344 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 BRD8Q9H0E9 1235 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 FAM207AQ9NSI2 230 aaPredicted RBP16.47■□□□□ 0.23
CHMP3-203ENST00000409225 PPIL1Q9Y3C6 166 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 SLC30A1Q9Y6M5 507 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 CSMD1Q96PZ7 3565 aa16.47■□□□□ 0.23
CHMP3-203ENST00000409225 GOLGA6L3A6NEY3 463 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 OR5K4A6NMS3 321 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 EIF3CLB5ME19 914 aaKnown RBP16.46■□□□□ 0.23
CHMP3-203ENST00000409225 EPHB6O15197 1021 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 TOX3O15405 576 aaPredicted RBP16.46■□□□□ 0.23
CHMP3-203ENST00000409225 LRCH4O75427 683 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 TIAF1O95411 115 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 LDLRP01130 860 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 POU3F2P20265 443 aaPredicted RBP16.46■□□□□ 0.23
CHMP3-203ENST00000409225 PSMA2P25787 234 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.46■□□□□ 0.23
CHMP3-203ENST00000409225 JMJD6Q6NYC1 403 aaPredicted RBP16.46■□□□□ 0.23
CHMP3-203ENST00000409225 FAM199XQ6PEV8 388 aaPredicted RBP16.46■□□□□ 0.23
CHMP3-203ENST00000409225 NLRP8Q86W28 1048 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 PHYKPLQ8IUZ5 450 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 NDUFAF2Q8N183 169 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 BBS5Q8N3I7 341 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 AVL9Q8NBF6 648 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 THAP4Q8WY91 577 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 PLEKHG4BQ96PX9 1271 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 EIF3CQ99613 913 aaKnown RBP16.46■□□□□ 0.23
CHMP3-203ENST00000409225 ING2Q9H160 280 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 OSGEPL1Q9H4B0 414 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 AKIRIN1Q9H9L7 192 aaPredicted RBP16.46■□□□□ 0.23
CHMP3-203ENST00000409225 MLXIPLQ9NP71 852 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 SLAMF7Q9NQ25 335 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 TAB2Q9NYJ8 693 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 SCHIP1Q9P0W5 487 aaPredicted RBP16.46■□□□□ 0.23
CHMP3-203ENST00000409225 CNOT6Q9ULM6 557 aaKnown RBP16.46■□□□□ 0.23
CHMP3-203ENST00000409225 ZNF451Q9Y4E5 1061 aa16.46■□□□□ 0.23
CHMP3-203ENST00000409225 WIPF3A6NGB9 483 aa16.45■□□□□ 0.22
CHMP3-203ENST00000409225 VIPP01282 170 aa16.45■□□□□ 0.22
CHMP3-203ENST00000409225 ZNF30P17039 623 aa16.45■□□□□ 0.22
CHMP3-203ENST00000409225 ELAVL4P26378 380 aaKnown RBP16.45■□□□□ 0.22
CHMP3-203ENST00000409225 STC1P52823 247 aa16.45■□□□□ 0.22
CHMP3-203ENST00000409225 DPYSQ14117 519 aa16.45■□□□□ 0.22
CHMP3-203ENST00000409225 CHRNA6Q15825 494 aa16.45■□□□□ 0.22
CHMP3-203ENST00000409225 CACHD1Q5VU97 1274 aa16.45■□□□□ 0.22
CHMP3-203ENST00000409225 C1QL3Q5VWW1 255 aa16.45■□□□□ 0.22
CHMP3-203ENST00000409225 PAPD7Q5XG87 772 aaKnown RBP16.45■□□□□ 0.22
CHMP3-203ENST00000409225 FAM92BQ6ZTR7 304 aa16.45■□□□□ 0.22
CHMP3-203ENST00000409225 TMEM26Q6ZUK4 368 aa16.45■□□□□ 0.22
CHMP3-203ENST00000409225 TRIM48Q8IWZ4 208 aa16.45■□□□□ 0.22
CHMP3-203ENST00000409225 ARFGAP1Q8N6T3 406 aa16.45■□□□□ 0.22
CHMP3-203ENST00000409225 Q8NA96 180 aa16.45■□□□□ 0.22
CHMP3-203ENST00000409225 SEC14L1Q92503 715 aa16.45■□□□□ 0.22
CHMP3-203ENST00000409225 UCK1Q9HA47 277 aa16.45■□□□□ 0.22
CHMP3-203ENST00000409225 SAMSN1Q9NSI8 373 aaKnown RBP16.45■□□□□ 0.22
CHMP3-203ENST00000409225 CWC15Q9P013 229 aaKnown RBP16.45■□□□□ 0.22
CHMP3-203ENST00000409225 PRRC2CQ9Y520 2896 aaKnown RBP16.44■□□□□ 0.22
CHMP3-203ENST00000409225 A0A0J9YYE9 177 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 GRID2O43424 1007 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 DPM1O60762 260 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 TRBC1P01850 177 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 PTPN4P29074 926 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 MMP13P45452 471 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 EPHB1P54762 984 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 IL10RAQ13651 578 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 NR6A1Q15406 480 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 RALGPS1Q5JS13 557 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 PRSS42Q7Z5A4 293 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 NSMCE1Q8WV22 266 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 RSC1A1Q92681 617 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 RMI1Q9H9A7 625 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 PDE7BQ9NP56 450 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 NT5MQ9NPB1 228 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 KLC4Q9NSK0 619 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 ETNK2Q9NVF9 386 aa16.44■□□□□ 0.22
CHMP3-203ENST00000409225 KRT86O43790 486 aa16.43■□□□□ 0.22
CHMP3-203ENST00000409225 FZD6O60353 706 aa16.43■□□□□ 0.22
CHMP3-203ENST00000409225 MAFKO60675 156 aa16.43■□□□□ 0.22
CHMP3-203ENST00000409225 CLDN7O95471 211 aa16.43■□□□□ 0.22
CHMP3-203ENST00000409225 XRCC1P18887 633 aaPredicted RBP16.43■□□□□ 0.22
CHMP3-203ENST00000409225 PTGIRP43119 386 aa16.43■□□□□ 0.22
CHMP3-203ENST00000409225 RPS15P62841 145 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms