RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 TBC1D24Q9ULP9 559 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 CMPK1P30085 196 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 ZNF132P52740 706 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 CCL23P55773 120 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 ELF3P78545 371 aaPredicted RBP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 ZNF155Q12901 538 aaPredicted RBP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 ZNF433Q8N7K0 673 aaPredicted RBP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 SRFBP1Q8NEF9 429 aaKnown RBP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 OR2L3Q8NG85 312 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 SLC35C1Q96A29 364 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 MYOCQ99972 504 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 LRRC19Q9H756 370 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 UPB1Q9UBR1 384 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 HES2Q9Y543 173 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 FADS2P1A8MWK0 482 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 ANKRD63C9JTQ0 380 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 TRAFD1O14545 582 aaPredicted RBP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 EIF2S3P41091 472 aaKnown RBP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 PSMD8P48556 350 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 GTF2BQ00403 316 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 SEMA5AQ13591 1074 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 EML3Q32P44 896 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 XKR4Q5GH76 650 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 SETD6Q8TBK2 473 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 DERAQ9Y315 318 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 VWA7Q9Y334 891 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 UBXN7O94888 489 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 FSBPO95073 299 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 CLDN9O95484 217 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 TEAD4Q15561 434 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 PSRC1Q6PGN9 363 aaPredicted RBP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 GALNT5Q7Z7M9 940 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 STYXQ8WUJ0 223 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 METTL18O95568 372 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 POLR2JP52435 117 aaKnown RBP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 CEBPGP53567 150 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 RANBP3LQ86VV4 465 aaPredicted RBP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 GALNT13Q8IUC8 556 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 KLHL32Q96NJ5 620 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 PHF12Q96QT6 1004 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 ABCG8Q9H221 673 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 PRDM12Q9H4Q4 367 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 DNAJC11Q9NVH1 559 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 U3KQV3 271 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 NCANO14594 1321 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 TPD52L2O43399 206 aaKnown RBP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 MPZL2O60487 215 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 CDC40O60508 579 aaKnown RBP eCLIP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 RNASEH2AO75792 299 aaKnown RBP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 ATXN1P54253 815 aaKnown RBP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 PPP1R26Q5T8A7 1209 aaPredicted RBP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 SLC30A6Q6NXT4 461 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 LRRC52Q8N7C0 313 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 TNFAIP8L1Q8WVP5 186 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 DDX3YO15523 660 aaKnown RBP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 PPP3CAQ08209 521 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 RASGEF1BQ0VAM2 473 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 IL18R1Q13478 541 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 RBM44Q6ZP01 1051 aaKnown RBP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 SNX33Q8WV41 574 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 CDH19Q9H159 772 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 ATP6AP2A0A1C7CYW4 349 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 A0A1W2PQ67 120 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 AREL1O15033 823 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 TLX3O43711 291 aaPredicted RBP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 DNAJA2O60884 412 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 FKTNO75072 461 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 ATP6AP2O75787 350 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 CD52P31358 61 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 PHF13Q86YI8 300 aaPredicted RBP11.98□□□□□ -0.49
SMCR8-201ENST00000406438 GPR152Q8TDT2 470 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 PPP1R13LQ8WUF5 828 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 MCCC2Q9HCC0 563 aa11.98□□□□□ -0.49
SMCR8-201ENST00000406438 CNTNAP1P78357 1384 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 CBFA2T3O75081 653 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 RPP38P78345 283 aaKnown RBP11.97□□□□□ -0.49
SMCR8-201ENST00000406438 MSANTD1Q6ZTZ1 278 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 GPALPP1Q8IXQ4 340 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 TOP6BLQ8N6T0 577 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 LENG1Q96BZ8 264 aaPredicted RBP11.97□□□□□ -0.49
SMCR8-201ENST00000406438 LGMNQ99538 433 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 DUSP9Q99956 384 aaKnown RBP11.97□□□□□ -0.49
SMCR8-201ENST00000406438 CLEC4AQ9UMR7 237 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 GRIP1Q9Y3R0 1128 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 PTCH2Q9Y6C5 1203 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 OR6C75A6NL08 312 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 BCKDKO14874 412 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 CLDN11O75508 207 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 FADS2O95864 444 aaKnown RBP11.97□□□□□ -0.49
SMCR8-201ENST00000406438 GNALP38405 381 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 CASP9P55211 416 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 GCNT6Q5T4J0 391 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 RHBDF2Q6PJF5 856 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 CATSPERGQ6ZRH7 1159 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 OR6K2Q8NGY2 324 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 SGCDQ92629 289 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 GAL3ST3Q96A11 431 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 RCN3Q96D15 328 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 NPAS2Q99743 824 aa11.97□□□□□ -0.49
SMCR8-201ENST00000406438 IDI2Q9BXS1 227 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms