RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 PCDHA11Q9Y5I1 949 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 F8W810 466 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 TK2O00142 265 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 KCNK1O00180 336 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 EML1O00423 815 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 MYL12BO14950 172 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 TGFB1I1O43294 461 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 PLATP00750 562 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 MYCP01106 439 aaPredicted RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 RPLP2P05387 115 aaKnown RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 PGK2P07205 417 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 C8BP07358 591 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 MMP8P22894 467 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 ELK4P28324 431 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 MAZP56270 477 aaKnown RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 PPP2R2BQ00005 443 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 PIGFQ07326 219 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 MAB21L1Q13394 359 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 PCBP1Q15365 356 aaKnown RBP eCLIP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 NPTX1Q15818 432 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 FAM214AQ32MH5 1076 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 PLEKHG6Q3KR16 790 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 PUS10Q3MIT2 529 aaKnown RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 ZNF568Q3ZCX4 644 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 CCDC157Q569K6 752 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 REP15Q6BDI9 236 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 NANOGP8Q6NSW7 305 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 METTL7BQ6UX53 244 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 FGD2Q7Z6J4 655 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 CADM3Q8N126 398 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 IL31RAQ8NI17 732 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 TMC2Q8TDI7 906 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 OTUB1Q96FW1 271 aaPredicted RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 TPD52L3Q96J77 140 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 FRMD6Q96NE9 622 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 C14orf119Q9NWQ9 140 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 NFKBIL1Q9UBC1 381 aaPredicted RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 EIF3KQ9UBQ5 218 aaKnown RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 EIF3LQ9Y262 564 aaKnown RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 GSTK1Q9Y2Q3 226 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 TESMINQ9Y4I5 508 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 COL4A6Q14031 1691 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 GOLGA4Q13439 2230 aaKnown RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 PRAMEF33A0A0G2JMD5 474 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 CHURC1-FNTBB4DL54 471 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 ZNF701M0R085 212 aaPredicted RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 XPNPEP2O43895 674 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 PRAMEF10O60809 474 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 SUPT20HL2P0C7V6 817 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 ARP10275 920 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 KCNA5P22460 613 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 ATP5F1P24539 256 aaPredicted RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 CYP2F1P24903 491 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 FMO3P31513 532 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 HADHBP55084 474 aaKnown RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 LIPEQ05469 1076 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 NFE2Q16621 373 aaPredicted RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 CLPPQ16740 277 aaPredicted RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 INSCQ1MX18 579 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 CCDC58Q4VC31 144 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 SPANXN3Q5MJ09 141 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 RBM48Q5RL73 367 aaKnown RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 ZNF470Q6ECI4 717 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 ANKRD26P1Q6NSI1 321 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 TAPT1Q6NXT6 567 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 TRMT10BQ6PF06 316 aaKnown RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 GADL1Q6ZQY3 521 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 ERMP1Q7Z2K6 904 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 DENND6AQ8IWF6 608 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 TIGD4Q8IY51 512 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 FAM109AQ8N4B1 249 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 NATD1Q8N6N6 113 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 VPS37AQ8NEZ2 397 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 TBC1D15Q8TC07 691 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 MYLPFQ96A32 169 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 IFT43Q96FT9 208 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 CTRCQ99895 268 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 RBM4BQ9BQ04 359 aaKnown RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 TUBA1CQ9BQE3 449 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 RBM4Q9BWF3 364 aaKnown RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 FUNDC2Q9BWH2 189 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 GTPBP2Q9BX10 602 aaKnown RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 ZNF518BQ9C0D4 1074 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 CRISPLD1Q9H336 500 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 EXD2Q9NVH0 621 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 SMOXQ9NWM0 555 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 THG1LQ9NWX6 298 aaKnown RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 H2AFY2Q9P0M6 372 aaPredicted RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 HSFX1Q9UBD0 423 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 LEF1Q9UJU2 399 aaPredicted RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 MKLN1Q9UL63 735 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 MAPRE3Q9UPY8 281 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 GPSM3Q9Y4H4 160 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 FABP12A6NFH5 140 aa5.82□□□□□ -1.48
HDAC9-203ENST00000406072 TRIM64A6NGJ6 449 aa5.82□□□□□ -1.48
HDAC9-203ENST00000406072 TRIM64BA6NI03 449 aa5.82□□□□□ -1.48
HDAC9-203ENST00000406072 E5RJQ4 531 aa5.82□□□□□ -1.48
HDAC9-203ENST00000406072 ATP6V1G2-DDX39BF2Z307 99 aa5.82□□□□□ -1.48
HDAC9-203ENST00000406072 EEF2KO00418 725 aaKnown RBP5.82□□□□□ -1.48
HDAC9-203ENST00000406072 CA12O43570 354 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms