RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 ILF3Q12906 894 aaKnown RBP eCLIP17.84■□□□□ 0.45
HDAC11-204ENST00000404040 XRCC4Q13426 336 aa17.84■□□□□ 0.45
HDAC11-204ENST00000404040 PNCKQ6P2M8 343 aa17.84■□□□□ 0.45
HDAC11-204ENST00000404040 PTRH1Q86Y79 214 aaKnown RBP17.84■□□□□ 0.45
HDAC11-204ENST00000404040 IL22RA1Q8N6P7 574 aa17.84■□□□□ 0.45
HDAC11-204ENST00000404040 HAUS1Q96CS2 278 aa17.84■□□□□ 0.45
HDAC11-204ENST00000404040 DDA1Q9BW61 102 aa17.84■□□□□ 0.45
HDAC11-204ENST00000404040 CINPQ9BW66 212 aaPredicted RBP17.84■□□□□ 0.45
HDAC11-204ENST00000404040 FRMD8P1Q9BZ68 369 aaPredicted RBP17.84■□□□□ 0.45
HDAC11-204ENST00000404040 SUDS3Q9H7L9 328 aaPredicted RBP17.84■□□□□ 0.45
HDAC11-204ENST00000404040 TAAR2Q9P1P5 351 aa17.84■□□□□ 0.45
HDAC11-204ENST00000404040 AMACRQ9UHK6 382 aa17.84■□□□□ 0.45
HDAC11-204ENST00000404040 UTP20O75691 2785 aaKnown RBP17.83■□□□□ 0.45
HDAC11-204ENST00000404040 CES2O00748 559 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 MATN3O15232 486 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 ZW10O43264 779 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 ECEL1O95672 775 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 TUBB4AP04350 444 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 CD1CP29017 333 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 CSF2RBP32927 897 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 UGT1A3P35503 534 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 GPR3P46089 330 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 LIMK2P53671 638 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 BCL2L1Q07817 233 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 SLC10A2Q12908 348 aaPredicted RBP17.83■□□□□ 0.44
HDAC11-204ENST00000404040 TRA2AQ13595 282 aaKnown RBP eCLIP17.83■□□□□ 0.44
HDAC11-204ENST00000404040 LBRQ14739 615 aaKnown RBP17.83■□□□□ 0.44
HDAC11-204ENST00000404040 ACOX1Q15067 660 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 MARC1Q5VT66 337 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 HEATR4Q86WZ0 1026 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 CCDC13Q8IYE1 715 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 PAF1Q8N7H5 531 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 AGBL5Q8NDL9 886 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 ART4Q93070 314 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 NUS1Q96E22 293 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 COQ10AQ96MF6 247 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 OLFM3Q96PB7 478 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 NAP1L3Q99457 506 aaPredicted RBP17.83■□□□□ 0.44
HDAC11-204ENST00000404040 CDH19Q9H159 772 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 PHPT1Q9NRX4 125 aaPredicted RBP17.83■□□□□ 0.44
HDAC11-204ENST00000404040 TRNAU1APQ9NX07 287 aaKnown RBP17.83■□□□□ 0.44
HDAC11-204ENST00000404040 B3GALT1Q9Y5Z6 326 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 NOTCH2Q04721 2471 aa17.83■□□□□ 0.44
HDAC11-204ENST00000404040 SPENQ96T58 3664 aaKnown RBP17.83■□□□□ 0.44
HDAC11-204ENST00000404040 NBPF19A0A087WUL8 3843 aa17.82■□□□□ 0.44
HDAC11-204ENST00000404040 CTAGE9A4FU28 777 aa17.82■□□□□ 0.44
HDAC11-204ENST00000404040 TRAFD1O14545 582 aaPredicted RBP17.82■□□□□ 0.44
HDAC11-204ENST00000404040 NTRK1P04629 796 aa17.82■□□□□ 0.44
HDAC11-204ENST00000404040 CEACAM5P06731 702 aa17.82■□□□□ 0.44
HDAC11-204ENST00000404040 THRAP10827 490 aa17.82■□□□□ 0.44
HDAC11-204ENST00000404040 TCP1P17987 556 aaKnown RBP17.82■□□□□ 0.44
HDAC11-204ENST00000404040 POLR2LP62875 67 aaKnown RBP17.82■□□□□ 0.44
HDAC11-204ENST00000404040 ZNF235Q14590 738 aa17.82■□□□□ 0.44
HDAC11-204ENST00000404040 NOMO1Q15155 1222 aa17.82■□□□□ 0.44
HDAC11-204ENST00000404040 LLGL1Q15334 1064 aa17.82■□□□□ 0.44
HDAC11-204ENST00000404040 SKIDA1Q1XH10 827 aa17.82■□□□□ 0.44
HDAC11-204ENST00000404040 ARHGAP36Q6ZRI8 547 aa17.82■□□□□ 0.44
HDAC11-204ENST00000404040 SLC13A5Q86YT5 568 aaPredicted RBP17.82■□□□□ 0.44
HDAC11-204ENST00000404040 CACNA2D3Q8IZS8 1091 aa17.82■□□□□ 0.44
HDAC11-204ENST00000404040 OR4D9Q8NGE8 314 aa17.82■□□□□ 0.44
HDAC11-204ENST00000404040 TFB1MQ8WVM0 346 aaKnown RBP17.82■□□□□ 0.44
HDAC11-204ENST00000404040 PATE1Q8WXA2 126 aa17.82■□□□□ 0.44
HDAC11-204ENST00000404040 NAPGQ99747 312 aaPredicted RBP17.82■□□□□ 0.44
HDAC11-204ENST00000404040 TEX101Q9BY14 249 aa17.82■□□□□ 0.44
HDAC11-204ENST00000404040 FRMD8Q9BZ67 464 aaPredicted RBP17.82■□□□□ 0.44
HDAC11-204ENST00000404040 B4GALT6Q9UBX8 382 aa17.82■□□□□ 0.44
HDAC11-204ENST00000404040 A8MX80 341 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 CEP104O60308 925 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 FUCA1P04066 466 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 AK4P27144 223 aaPredicted RBP17.81■□□□□ 0.44
HDAC11-204ENST00000404040 CASRP41180 1078 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 MMP13P45452 471 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 CCR10P46092 362 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 GNPDA1P46926 289 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 AP1S1P61966 158 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 FOXK1P85037 733 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 ADCY2Q08462 1091 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 NSUN2Q08J23 767 aaKnown RBP eCLIP17.81■□□□□ 0.44
HDAC11-204ENST00000404040 AP1B1Q10567 949 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 KLF1Q13351 362 aaPredicted RBP17.81■□□□□ 0.44
HDAC11-204ENST00000404040 UBAP2LQ14157 1087 aaKnown RBP17.81■□□□□ 0.44
HDAC11-204ENST00000404040 CNGA3Q16281 694 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 RALGPS1Q5JS13 557 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 AADACL2Q6P093 401 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 SLC30A9Q6PML9 568 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 NPNTQ6UXI9 565 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 LURAP1LQ8IV03 231 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 CDKL3Q8IVW4 592 aaPredicted RBP17.81■□□□□ 0.44
HDAC11-204ENST00000404040 TP53INP2Q8IXH6 220 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 PTCD2Q8WV60 388 aaKnown RBP17.81■□□□□ 0.44
HDAC11-204ENST00000404040 SPOCK2Q92563 424 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 MAML1Q92585 1016 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 NSMCE3Q96MG7 304 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 CATSPER2Q96P56 530 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 PSKH2Q96QS6 385 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 SUFUQ9UMX1 484 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 SNX12Q9UMY4 172 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 ST14Q9Y5Y6 855 aa17.81■□□□□ 0.44
HDAC11-204ENST00000404040 IGHV1OR21-1A0A087WYE8 117 aa17.8■□□□□ 0.44
HDAC11-204ENST00000404040 CLEC18AA5D8T8 446 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms