RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 NUP214P35658 2090 aaPredicted RBP11.9□□□□□ -0.5
RBM39-206ENST00000403542 MROH6A6NGR9 719 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 NOBOXO60393 691 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 RAMP2O60895 175 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 OR4F21O95013 312 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 IL7RP16871 459 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 FDXRP22570 491 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 IL12AP29459 219 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 RPS9P46781 194 aaKnown RBP11.9□□□□□ -0.5
RBM39-206ENST00000403542 PURAQ00577 322 aaKnown RBP11.9□□□□□ -0.5
RBM39-206ENST00000403542 GNA12Q03113 381 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 PTPRNQ16849 979 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 IMPG1Q17R60 797 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 SLC36A3Q495N2 470 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 ZBED5Q49AG3 693 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 CYBRD1Q53TN4 286 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 LDLRAD1Q5T700 205 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 MRNIPQ6NTE8 343 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 BLOC1S3Q6QNY0 202 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 CD300LGQ6UXG3 332 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 STK32CQ86UX6 486 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 CLEC4FQ8N1N0 589 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 THEM5Q8N1Q8 247 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 TRPV3Q8NET8 790 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 OR7D4Q8NG98 312 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 ATOH8Q96SQ7 321 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 HOPXQ9BPY8 73 aaPredicted RBP11.9□□□□□ -0.5
RBM39-206ENST00000403542 HGH1Q9BTY7 390 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 TRMOQ9BU70 441 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 ACTR3BQ9P1U1 418 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 ZMYM5Q9UJ78 669 aa11.9□□□□□ -0.5
RBM39-206ENST00000403542 OAS3Q9Y6K5 1087 aaKnown RBP11.9□□□□□ -0.5
RBM39-206ENST00000403542 SLC12A8A0AV02 714 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 TNFRSF10BO14763 440 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 RSL1D1O76021 490 aaKnown RBP11.89□□□□□ -0.51
RBM39-206ENST00000403542 TCF3P15923 654 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 RGRP47804 291 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 NANOGP8Q6NSW7 305 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 ZC3H7AQ8IWR0 971 aaKnown RBP11.89□□□□□ -0.51
RBM39-206ENST00000403542 DCP1BQ8IZD4 617 aaKnown RBP11.89□□□□□ -0.51
RBM39-206ENST00000403542 FAM86B1Q8N7N1 296 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 BHMTQ93088 406 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 BIRC7Q96CA5 298 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 SGIP1Q9BQI5 828 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 TBCDQ9BTW9 1192 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 C9orf16Q9BUW7 83 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 TRIM15Q9C019 465 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 ING2Q9H160 280 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 NANOGQ9H9S0 305 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 FANCEQ9HB96 536 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 SDR39U1Q9NRG7 319 aaPredicted RBP11.89□□□□□ -0.51
RBM39-206ENST00000403542 SMPD3Q9NY59 655 aaPredicted RBP11.89□□□□□ -0.51
RBM39-206ENST00000403542 DGKBQ9Y6T7 804 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 MIA3Q5JRA6 1907 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 HAS3O00219 553 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 SYNCRIPO60506 623 aaKnown RBP11.89□□□□□ -0.51
RBM39-206ENST00000403542 CNPP09543 421 aaKnown RBP11.89□□□□□ -0.51
RBM39-206ENST00000403542 BMP1P13497 986 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 MATN1P21941 496 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 MYF6P23409 242 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 HTR6P50406 440 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 LCP2Q13094 533 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 EIF4EBP2Q13542 120 aaPredicted RBP11.89□□□□□ -0.51
RBM39-206ENST00000403542 SGO1Q5FBB7 561 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 KANK2Q63ZY3 851 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 PIANPQ8IYJ0 282 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 GABPB2Q8TAK5 448 aaPredicted RBP11.89□□□□□ -0.51
RBM39-206ENST00000403542 FBXO30Q8TB52 745 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 FNDC8Q8TC99 324 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 HM13Q8TCT9 377 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 ITCHQ96J02 903 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 NSMCE3Q96MG7 304 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 SERPINB11Q96P15 392 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 DGCR6LQ9BY27 220 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 CD274Q9NZQ7 290 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 ANAPC2Q9UJX6 822 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 PCDHGC4Q9Y5F7 938 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 PCDHA9Q9Y5H5 950 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 GPR45Q9Y5Y3 372 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 U3KQV3 271 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 SNX2O60749 519 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 NDUFS3O75489 264 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 SLC22A3O75751 556 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 BMP10O95393 424 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 PARNO95453 639 aaKnown RBP11.89□□□□□ -0.51
RBM39-206ENST00000403542 GUCA1CO95843 209 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 LDLRP01130 860 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 UGT1A1P22309 533 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 UGT1A4P22310 534 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 CYP2C18P33260 490 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 RFC2P35250 354 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 UGT1A3P35503 534 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 UGT1A5P35504 534 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 KCNQ1P51787 676 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 ZNF135P52742 658 aaPredicted RBP11.89□□□□□ -0.51
RBM39-206ENST00000403542 ZNF33AQ06730 810 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 ATP6AP1Q15904 470 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 ANKS6Q68DC2 871 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 ABRAXAS1Q6UWZ7 409 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 TRIM74Q86UV6 250 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms