RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 LILRA5A6NI73 299 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 FADS2P1A8MWK0 482 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 KRT86O43790 486 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 SNX2O60749 519 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 DDAH2O95865 285 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 CYP2A6P11509 494 aaPredicted RBP11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 FGF5P12034 268 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 ACP5P13686 325 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 MAN1A1P33908 653 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 SOX5P35711 763 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 STC1P52823 247 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 POLR2FP61218 127 aaKnown RBP11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 LRP8Q14114 963 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 ZNF648Q5T619 568 aaPredicted RBP11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 TMCO4Q5TGY1 634 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 FAM69BQ5VUD6 431 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 CERS6Q6ZMG9 384 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 RBMXL3Q8N7X1 1067 aaKnown RBP11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PRR7Q8TB68 274 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 RSC1A1Q92681 617 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 TGM7Q96PF1 710 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 RANBP9Q96S59 729 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 MFRPQ9BY79 579 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 ARFGAP3Q9NP61 516 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 NLRC4Q9NPP4 1024 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 LHX9Q9NQ69 397 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 TAS2R14Q9NYV8 317 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 DTLQ9NZJ0 730 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 CWC15Q9P013 229 aaKnown RBP11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 SLC23A2Q9UGH3 650 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PCSK1NQ9UHG2 260 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 ADGRG1Q9Y653 693 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 ZGRF1Q86YA3 2104 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 ARGFXA6NJG6 315 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 MAFKO60675 156 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 RECKO95980 971 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 F3P13726 295 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 HTR7P34969 479 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 SLC19A1P41440 591 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 NSFP46459 744 aaKnown RBP11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 CCL11P51671 97 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 AIF1P55008 147 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PEX6Q13608 980 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 UGT8Q16880 541 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PWWP2BQ6NUJ5 590 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 JMJD6Q6NYC1 403 aaPredicted RBP11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 DNAJC24Q6P3W2 148 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 TRIM72Q6ZMU5 477 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 LYSMD3Q7Z3D4 306 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 SLC9B2Q86UD5 537 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 NLRP8Q86W28 1048 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 KLHL6Q8WZ60 621 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 STAMBPL1Q96FJ0 436 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 SLC25A23Q9BV35 468 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 BRD8Q9H0E9 1235 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 KCTD5Q9NXV2 234 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 TAB2Q9NYJ8 693 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 ZNF624Q9P2J8 865 aaPredicted RBP11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 LNPEPQ9UIQ6 1025 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PADI1Q9ULC6 663 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 DNHD1Q96M86 4753 aa11.74□□□□□ -0.53
SPTLC1P3-201ENST00000403408 FER1L5A0AVI2 2057 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 CEACAM4O75871 244 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 CLDN7O95471 211 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 ASMTLO95671 621 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PRLP01236 227 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 CALB1P05937 261 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 BRAFP15056 766 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 FOLR1P15328 257 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 TCF4P15884 667 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 GARSP41250 739 aaKnown RBP11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 RENBPP51606 427 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PGDP52209 483 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 KCNAB1Q14722 419 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 DPCR1Q3MIW9 517 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 SLC6A19Q695T7 634 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 LCN10Q6JVE6 187 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 TMEM26Q6ZUK4 368 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 ZNF765Q7L2R6 523 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PLXDC1Q8IUK5 500 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 RASGRP3Q8IV61 690 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 EXD1Q8NHP7 514 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 ADAMTS17Q8TE56 1095 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 ZNF599Q96NL3 588 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 HERPUD2Q9BSE4 406 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 NUDT9Q9BW91 350 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 FAM207AQ9NSI2 230 aaPredicted RBP11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 DONSONQ9NYP3 566 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 CCDC88CQ9P219 2028 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 CNOT8Q9UFF9 292 aaKnown RBP11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 SIK3Q9Y2K2 1263 aa11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PCDHGA9Q9Y5G4 932 aaKnown RBP11.73□□□□□ -0.53
SPTLC1P3-201ENST00000403408 NAV3Q8IVL0 2385 aa11.72□□□□□ -0.53
SPTLC1P3-201ENST00000403408 IGHV5-51A0A0C4DH38 117 aa11.72□□□□□ -0.53
SPTLC1P3-201ENST00000403408 KIR2DS5A0A0G2JLQ3 304 aa11.72□□□□□ -0.53
SPTLC1P3-201ENST00000403408 A0A0G2JNG1 304 aa11.72□□□□□ -0.53
SPTLC1P3-201ENST00000403408 A0A0J9YYE9 177 aa11.72□□□□□ -0.53
SPTLC1P3-201ENST00000403408 KIR2DS3K7RE56 304 aa11.72□□□□□ -0.53
SPTLC1P3-201ENST00000403408 ATMINO43313 823 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms