RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 VPS4BO75351 444 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 RFPL1O75677 317 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 KIAA0754O94854 1291 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 UBXN7O94888 489 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 AGFG2O95081 481 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 PRLP01236 227 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 C9P02748 559 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 PDGFAP04085 211 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 RARAP10276 462 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 CDK11BP21127 795 aaKnown RBP14.38□□□□□ -0.11
VAMP1-203ENST00000400911 SEPHS1P49903 392 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 UBE2IP63279 158 aaKnown RBP14.38□□□□□ -0.11
VAMP1-203ENST00000400911 DSC2Q02487 901 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 TXNRD3NBQ6F5E7 133 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 PHYKPLQ8IUZ5 450 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 RASGRP3Q8IV61 690 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 TGM7Q96PF1 710 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 PLEKHG4BQ96PX9 1271 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 POLR1EQ9GZS1 481 aaKnown RBP14.38□□□□□ -0.11
VAMP1-203ENST00000400911 TWSG1Q9GZX9 223 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 RMI1Q9H9A7 625 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 ARFGAP3Q9NP61 516 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 SCHIP1Q9P0W5 487 aaPredicted RBP14.38□□□□□ -0.11
VAMP1-203ENST00000400911 MYO1AQ9UBC5 1043 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 PLEKHB1Q9UF11 243 aaPredicted RBP14.38□□□□□ -0.11
VAMP1-203ENST00000400911 VPS4AQ9UN37 437 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 SLC30A1Q9Y6M5 507 aa14.38□□□□□ -0.11
VAMP1-203ENST00000400911 ARHGEF17Q96PE2 2063 aaPredicted RBP14.37□□□□□ -0.11
VAMP1-203ENST00000400911 LILRA5A6NI73 299 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 TTLL8A6PVC2 850 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 NUAK1O60285 661 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 NDUFA10O95299 355 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 ZNF8P17098 575 aaPredicted RBP14.37□□□□□ -0.11
VAMP1-203ENST00000400911 AMD1P17707 334 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 GNLYP22749 145 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 SERPINB6P35237 376 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 LEPRP48357 1165 aaKnown RBP14.37□□□□□ -0.11
VAMP1-203ENST00000400911 SPINT3P49223 89 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 PMS2P54278 862 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 IL11RAQ14626 422 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 ZNF648Q5T619 568 aaPredicted RBP14.37□□□□□ -0.11
VAMP1-203ENST00000400911 HENMT1Q5T8I9 393 aaKnown RBP14.37□□□□□ -0.11
VAMP1-203ENST00000400911 FHL5Q5TD97 284 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 APTXQ7Z2E3 356 aaKnown RBP14.37□□□□□ -0.11
VAMP1-203ENST00000400911 ZNF571Q7Z3V5 609 aaPredicted RBP14.37□□□□□ -0.11
VAMP1-203ENST00000400911 LPCAT1Q8NF37 534 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 ZNF653Q96CK0 615 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 CARD9Q9H257 536 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 OSGEPL1Q9H4B0 414 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 FAM83DQ9H4H8 585 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 HAUS4Q9H6D7 363 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 PCDH18Q9HCL0 1135 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 KLC4Q9NSK0 619 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 ATXN10Q9UBB4 475 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 KCND3Q9UK17 655 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 DNPEPQ9ULA0 475 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 TTLL3Q9Y4R7 772 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 SCINQ9Y6U3 715 aa14.37□□□□□ -0.11
VAMP1-203ENST00000400911 C1orf232A0A0U1RR37 186 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 KIF1CO43896 1103 aaKnown RBP14.36□□□□□ -0.11
VAMP1-203ENST00000400911 SPAG6O75602 509 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 CREG1O75629 220 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 RASSF9O75901 435 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 DNAJB5O75953 348 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 VIPP01282 170 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 CCNYL3P0C7X3 344 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 GZMAP12544 262 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 XRCC1P18887 633 aaPredicted RBP14.36□□□□□ -0.11
VAMP1-203ENST00000400911 CES1P23141 567 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 CAPRIN2Q6IMN6 1127 aaKnown RBP14.36□□□□□ -0.11
VAMP1-203ENST00000400911 TMEM26Q6ZUK4 368 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 LRRC49Q8IUZ0 686 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 RAVER1Q8IY67 606 aaKnown RBP14.36□□□□□ -0.11
VAMP1-203ENST00000400911 AOPEPQ8N6M6 819 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 AVL9Q8NBF6 648 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 TDRD1Q9BXT4 1180 aaKnown RBP14.36□□□□□ -0.11
VAMP1-203ENST00000400911 OR2AG1Q9H205 316 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 ZNF768Q9H5H4 540 aaKnown RBP14.36□□□□□ -0.11
VAMP1-203ENST00000400911 UCK1Q9HA47 277 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 RBM22Q9NW64 420 aaKnown RBP eCLIP14.36□□□□□ -0.11
VAMP1-203ENST00000400911 ZNF624Q9P2J8 865 aaPredicted RBP14.36□□□□□ -0.11
VAMP1-203ENST00000400911 SLC23A2Q9UGH3 650 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 LNPEPQ9UIQ6 1025 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 PADI1Q9ULC6 663 aa14.36□□□□□ -0.11
VAMP1-203ENST00000400911 USP9XQ93008 2570 aaPredicted RBP14.36□□□□□ -0.11
VAMP1-203ENST00000400911 NOTCH2Q04721 2471 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 LRRC53A6NM62 1247 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 DDX3XO00571 662 aaKnown RBP eCLIP14.35□□□□□ -0.11
VAMP1-203ENST00000400911 MATN3O15232 486 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 TOX3O15405 576 aaPredicted RBP14.35□□□□□ -0.11
VAMP1-203ENST00000400911 IL4RP24394 825 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 GARSP41250 739 aaKnown RBP14.35□□□□□ -0.11
VAMP1-203ENST00000400911 SLC19A1P41440 591 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 ZNF165P49910 485 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 CLCNKAP51800 687 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 RPL26P61254 145 aaKnown RBP14.35□□□□□ -0.11
VAMP1-203ENST00000400911 MYL5Q02045 173 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 NIPAL4Q0D2K0 466 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 MMRN1Q13201 1228 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 SEPT7Q16181 437 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms