RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 QSOX1O00391 747 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 CYP1A2P05177 515 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 CSN2P05814 226 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 CBX3Q13185 183 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 LYPLAL1Q5VWZ2 237 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 NIPA1Q7RTP0 329 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 OAFQ86UD1 273 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 FBXO22Q8NEZ5 403 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 NOL11Q9H8H0 719 aaKnown RBP13.69□□□□□ -0.22
VAPA-202ENST00000400000 ACTL7BQ9Y614 415 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 KHNYNO15037 678 aaKnown RBP13.69□□□□□ -0.22
VAPA-202ENST00000400000 MT-CYBP00156 380 aaPredicted RBP13.69□□□□□ -0.22
VAPA-202ENST00000400000 CST3P01034 146 aaPredicted RBP13.69□□□□□ -0.22
VAPA-202ENST00000400000 NCK1P16333 377 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 PRKAA2P54646 552 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 KLF1Q13351 362 aaPredicted RBP13.69□□□□□ -0.22
VAPA-202ENST00000400000 FAM131AQ6UXB0 335 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 SAMD3Q8N6K7 520 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 FATE1Q969F0 183 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.69□□□□□ -0.225e-9■□□□□ 10.1
VAPA-202ENST00000400000 MTRF1O75570 445 aaKnown RBP13.69□□□□□ -0.22
VAPA-202ENST00000400000 CD48P09326 243 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 ST3GAL1Q11201 340 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 FIGNQ5HY92 759 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 HECTD2Q5U5R9 776 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 MZT2BQ6NZ67 158 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 GPR21Q99679 349 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 IDI2Q9BXS1 227 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 FGFBP2Q9BYJ0 223 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 CHRAC1Q9NRG0 131 aa13.69□□□□□ -0.22
VAPA-202ENST00000400000 RBMX2Q9Y388 322 aaKnown RBP13.69□□□□□ -0.22
VAPA-202ENST00000400000 ATG13O75143 517 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 AP2A2O94973 939 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 MATKP42679 507 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 WASHC2DQ5SRD0 308 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 BHLHB9Q6PI77 547 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 CXXC5Q7LFL8 322 aaKnown RBP13.68□□□□□ -0.22
VAPA-202ENST00000400000 UNC93AQ86WB7 457 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 KLHL32Q96NJ5 620 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 ASB2Q96Q27 587 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 A0A0J9YYE9 177 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 UBAP2Q5T6F2 1119 aaKnown RBP13.68□□□□□ -0.22
VAPA-202ENST00000400000 LIN54Q6MZP7 749 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 FBXO42Q6P3S6 717 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 RTL4Q6ZR62 310 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 GIT1Q9Y2X7 761 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 hCG_1818297A0A087WSY0 165 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 A8MUI8 341 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 MTA1Q13330 715 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 SNX20Q7Z614 316 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 RASGRP3Q8IV61 690 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 SETD7Q8WTS6 366 aaKnown RBP13.68□□□□□ -0.22
VAPA-202ENST00000400000 ENOPH1Q9UHY7 261 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 TBC1D24Q9ULP9 559 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 PTPN9P43378 593 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 SLC7A2P52569 658 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 SP2Q02086 613 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 SIM2Q14190 667 aaPredicted RBP13.68□□□□□ -0.22
VAPA-202ENST00000400000 RNASEH2BQ5TBB1 312 aaKnown RBP13.68□□□□□ -0.22
VAPA-202ENST00000400000 ZBTB2Q8N680 514 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 PDP1Q9P0J1 537 aaPredicted RBP13.68□□□□□ -0.22
VAPA-202ENST00000400000 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.68□□□□□ -0.22
VAPA-202ENST00000400000 SERPINB7O75635 380 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 ALOX5P09917 674 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 PPM1AP35813 382 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 DNASE1L1P49184 302 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 GDI2P50395 445 aaKnown RBP13.68□□□□□ -0.22
VAPA-202ENST00000400000 SNAPC1Q16533 368 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 ATXN2LQ8WWM7 1075 aaKnown RBP13.68□□□□□ -0.22
VAPA-202ENST00000400000 TRMT61BQ9BVS5 477 aaKnown RBP13.68□□□□□ -0.22
VAPA-202ENST00000400000 DHRS7Q9Y394 339 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 RPTORQ8N122 1335 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 RIC1Q4ADV7 1423 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 ABCA9Q8IUA7 1624 aa13.68□□□□□ -0.22
VAPA-202ENST00000400000 UBE2QL1A1L167 161 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 hCG_2039718K7EN88 272 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 WWP2O00308 870 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 SLC22A3O75751 556 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 S100GP29377 79 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 CTSKP43235 329 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 KCNJ5P48544 419 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 OC90Q02509 493 aaPredicted RBP13.67□□□□□ -0.22
VAPA-202ENST00000400000 LSM12Q3MHD2 195 aaKnown RBP13.67□□□□□ -0.22
VAPA-202ENST00000400000 CRY2Q49AN0 593 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 CAPN13Q6MZZ7 669 aaPredicted RBP13.67□□□□□ -0.22
VAPA-202ENST00000400000 ZNF613Q6PF04 617 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 HTRA1Q92743 480 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 SLC25A36Q96CQ1 311 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 IL12RB2Q99665 862 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 SYT17Q9BSW7 474 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 C3orf14Q9HBI5 128 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 KCNK4Q9NYG8 393 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 FBXO5Q9UKT4 447 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 VWA7Q9Y334 891 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 ARL5CA6NH57 179 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 CDH5P33151 784 aaPredicted RBP13.67□□□□□ -0.22
VAPA-202ENST00000400000 ENPEPQ07075 957 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 PDK3Q15120 406 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 UBXN11Q5T124 520 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 CLCC1Q96S66 551 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms