RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 TMEM176AQ96HP8 235 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 RTP3Q9BQQ7 232 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 HERPUD2Q9BSE4 406 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 C12orf4Q9NQ89 552 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 OR12D3Q9UGF7 316 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 SERTAD3Q9UJW9 196 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 DOCK3Q8IZD9 2030 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 A0A0G2JMP0 313 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 H0YC42 278 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 B3GALT2O43825 422 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 FKBP6O75344 327 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 GLSO94925 669 aaPredicted RBP2.71□□□□□ -1.97
CHD9-202ENST00000398510 MMP3P08254 477 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 GNAZP19086 355 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 LPOP22079 712 aaPredicted RBP2.71□□□□□ -1.97
CHD9-202ENST00000398510 PITPNAQ00169 270 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 SLC6A3Q01959 620 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 MGAT5Q09328 741 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 ESCO2Q56NI9 601 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 SYCE2Q6PIF2 218 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 AHSA2Q719I0 299 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 UBR7Q8N806 425 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 IPMKQ8NFU5 416 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 OR4M2Q8NGB6 313 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 HTR3CQ8WXA8 447 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 HHIPL1Q96JK4 782 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 SYT15Q9BQS2 421 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 MVB12BQ9H7P6 319 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 FBRSL1Q9HCM7 1045 aaKnown RBP2.71□□□□□ -1.97
CHD9-202ENST00000398510 TDP1Q9NUW8 608 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 EMC3Q9P0I2 261 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 ACTR3BQ9P1U1 418 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 KLHL13Q9P2N7 655 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 ACSL5Q9ULC5 683 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 ESPL1Q14674 2120 aa2.71□□□□□ -1.97
CHD9-202ENST00000398510 BTNL10A8MVZ5 291 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 PDLIM1O00151 329 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 FPGTO14772 594 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 RGS10O43665 173 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 ZNF432O94892 652 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 CYP2B6P20813 491 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 MZF1P28698 734 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 CCT3P49368 545 aaKnown RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 TOP3AQ13472 1001 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 GBX1Q14549 363 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 SLC14A2Q15849 920 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 TNFAIP8L3Q5GJ75 292 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 PXKQ7Z7A4 578 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 GPAT4Q86UL3 456 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 KCNMB4Q86W47 210 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 C12orf56Q8IXR9 622 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 ADGRG2Q8IZP9 1017 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 ANKFN1Q8N957 763 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 TC2NQ8N9U0 490 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 TRPV1Q8NER1 839 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 KIAA1191Q96A73 305 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 FAM120BQ96EK7 910 aaKnown RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 PHB2Q99623 299 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 TBL1YQ9BQ87 522 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 DUSP16Q9BY84 665 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 ACTRT3Q9BYD9 372 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 RRAGCQ9HB90 399 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 CLN6Q9NWW5 311 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 CRNNQ9UBG3 495 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 FETUBQ9UGM5 382 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 UGT2B11O75310 529 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 RBMXL2O75526 392 aaKnown RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 CLK2P49760 499 aaKnown RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 RPP30P78346 268 aaKnown RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 ST3GAL4Q11206 333 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 MTAPQ13126 283 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 MAPK7Q13164 816 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 PKP1Q13835 747 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 CCINQ13939 588 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 BAATQ14032 418 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 CEP78Q5JTW2 689 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 EIF3MQ7L2H7 374 aaKnown RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 CBWD2Q8IUF1 395 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 CYP2W1Q8TAV3 490 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 FNIP1Q8TF40 1166 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 ZNF354BQ96LW1 612 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 SLC38A3Q99624 504 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 THTPAQ9BU02 230 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 KCNH6Q9H252 994 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 LDAHQ9H6V9 325 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 RIOX1Q9H6W3 641 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 RMI1Q9H9A7 625 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 SGK2Q9HBY8 427 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 PRDM4Q9UKN5 801 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 RRP15Q9Y3B9 282 aaKnown RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 CLCA3PQ9Y6N3 262 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 CNTNAP5Q8WYK1 1306 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 SH3PXD2BA1X283 911 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 HTR3EA5X5Y0 456 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 KPNA3O00505 521 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 WFS1O76024 890 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 SLC25A14O95258 325 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 HLA-DQA2P01906 255 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 UMPSP11172 480 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms