RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 SLC5A11Q8WWX8 675 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 RLN3Q8WXF3 142 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 SAT2Q96F10 170 aaPredicted RBP12.76□□□□□ -0.37
CCBE1-201ENST00000398179 EBNA1BP2Q99848 306 aaKnown RBP12.76□□□□□ -0.37
CCBE1-201ENST00000398179 TP63Q9H3D4 680 aaPredicted RBP12.76□□□□□ -0.37
CCBE1-201ENST00000398179 LEMD3Q9Y2U8 911 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 PCDHGA2Q9Y5H1 932 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 HNRNPDLO14979 420 aaKnown RBP12.75□□□□□ -0.37
CCBE1-201ENST00000398179 ZNF432O94892 652 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 CYP21A2P08686 494 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 SCARB2Q14108 478 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 TBCELQ5QJ74 424 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 WDR74Q6RFH5 385 aaPredicted RBP12.75□□□□□ -0.37
CCBE1-201ENST00000398179 EMILIN3Q9NT22 766 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 BLOC1S4Q9NUP1 217 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 USP17L4A6NCW7 530 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 USP17L8P0C7I0 530 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 NELFEP18615 380 aaKnown RBP12.75□□□□□ -0.37
CCBE1-201ENST00000398179 CHMP24386 653 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 GRIA4P48058 902 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 PFKFB3Q16875 520 aaPredicted RBP12.75□□□□□ -0.37
CCBE1-201ENST00000398179 BBS12Q6ZW61 710 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 EML4Q9HC35 981 aaKnown RBP12.75□□□□□ -0.37
CCBE1-201ENST00000398179 CPNE5Q9HCH3 593 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 DBR1Q9UK59 544 aaKnown RBP12.75□□□□□ -0.37
CCBE1-201ENST00000398179 PCDHGB1Q9Y5G3 927 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 TNPO3Q9Y5L0 923 aaKnown RBP12.75□□□□□ -0.37
CCBE1-201ENST00000398179 ZNF518AQ6AHZ1 1483 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 PBRM1Q86U86 1689 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 MID1O15344 667 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 TFPTP0C1Z6 253 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 PF4V1P10720 104 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 RAB13P51153 203 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 BDH1Q02338 343 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 RESP18Q5W5W9 173 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 TRUB1Q8WWH5 349 aaKnown RBP12.75□□□□□ -0.37
CCBE1-201ENST00000398179 HLA-CQ95604 372 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 GPR63Q9BZJ6 419 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 IGSF9Q9P2J2 1179 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 GTF2IRD1Q9UHL9 959 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 PLA2G4CQ9UP65 541 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 DNAJC16Q9Y2G8 782 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 PCDH11XQ9BZA7 1347 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 PCDH11YQ9BZA8 1340 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 A0A0U1RQK1 487 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 ZNF320A2RRD8 509 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 B4E171 279 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 H2AFYO75367 372 aaKnown RBP12.75□□□□□ -0.37
CCBE1-201ENST00000398179 CAMTA2O94983 1202 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 FTLP02792 175 aaPredicted RBP12.75□□□□□ -0.37
CCBE1-201ENST00000398179 LCN1P31025 176 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 ARL6IP1Q15041 203 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 MOXD1Q6UVY6 613 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 SCN4BQ8IWT1 228 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 SVBPQ8N300 66 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 CCDC107Q8WV48 283 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 DDX1Q92499 740 aaKnown RBP12.75□□□□□ -0.37
CCBE1-201ENST00000398179 GMCL1Q96IK5 515 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 MS4A14Q96JA4 679 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 DMRTA2Q96SC8 542 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 SIK2Q9H0K1 926 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 RASSF1Q9NS23 344 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 PIK3R2O00459 728 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 PPP1R2P9O14990 202 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 SULT1C4O75897 302 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 CHRM3P20309 590 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 ZNF10P21506 573 aaPredicted RBP12.75□□□□□ -0.37
CCBE1-201ENST00000398179 PTX3P26022 381 aaPredicted RBP12.75□□□□□ -0.37
CCBE1-201ENST00000398179 HOXA10P31260 410 aaPredicted RBP12.75□□□□□ -0.37
CCBE1-201ENST00000398179 NNMTP40261 264 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 TRIM28Q13263 835 aaKnown RBP12.75□□□□□ -0.37
CCBE1-201ENST00000398179 YIF1BQ5BJH7 314 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 OR6B2Q6IFH4 312 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 CD300LFQ8TDQ1 290 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 ACOT12Q8WYK0 555 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 FAM162AQ96A26 154 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 LRCH3Q96II8 777 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 CRB3Q9BUF7 120 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 MANSC1Q9H8J5 431 aa12.75□□□□□ -0.37
CCBE1-201ENST00000398179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCBE1-201ENST00000398179 TEX33O43247 280 aa12.74□□□□□ -0.37
CCBE1-201ENST00000398179 LRRTM2O43300 516 aa12.74□□□□□ -0.37
CCBE1-201ENST00000398179 ADH1AP07327 375 aa12.74□□□□□ -0.37
CCBE1-201ENST00000398179 RD3LP0DJH9 198 aa12.74□□□□□ -0.37
CCBE1-201ENST00000398179 CD58P19256 250 aa12.74□□□□□ -0.37
CCBE1-201ENST00000398179 ACTR1AP61163 376 aa12.74□□□□□ -0.37
CCBE1-201ENST00000398179 FNDC5Q8NAU1 212 aa12.74□□□□□ -0.37
CCBE1-201ENST00000398179 CERS2Q96G23 380 aa12.74□□□□□ -0.37
CCBE1-201ENST00000398179 MRPL48Q96GC5 212 aaKnown RBP12.74□□□□□ -0.37
CCBE1-201ENST00000398179 BTBD1Q9H0C5 482 aa12.74□□□□□ -0.37
CCBE1-201ENST00000398179 NMNAT1Q9HAN9 279 aaPredicted RBP12.74□□□□□ -0.37
CCBE1-201ENST00000398179 TMEM9Q9P0T7 183 aa12.74□□□□□ -0.37
CCBE1-201ENST00000398179 SIX4Q9UIU6 781 aa12.74□□□□□ -0.37
CCBE1-201ENST00000398179 RAB21Q9UL25 225 aa12.74□□□□□ -0.37
CCBE1-201ENST00000398179 ARL5AQ9Y689 179 aa12.74□□□□□ -0.37
CCBE1-201ENST00000398179 MROH5Q6ZUA9 1318 aa12.74□□□□□ -0.37
CCBE1-201ENST00000398179 METTL18O95568 372 aa12.74□□□□□ -0.37
CCBE1-201ENST00000398179 ALDH7A1P49419 539 aaKnown RBP12.74□□□□□ -0.37
CCBE1-201ENST00000398179 ENTPD1P49961 510 aa12.74□□□□□ -0.37
CCBE1-201ENST00000398179 DRG2P55039 364 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms