RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 RYBPQ8N488 228 aaPredicted RBP15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 FBXL20Q96IG2 436 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 AKTIPQ9H8T0 292 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 MRM3Q9HC36 420 aaKnown RBP15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 FLRT1Q9NZU1 646 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 CPA4Q9UI42 421 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 RNF103-CHMP3A0A140T963 221 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 PPP6CO00743 305 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 TREHO43280 583 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 SLC4A1P02730 911 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 ZNF865P0CJ78 1059 aaPredicted RBP15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 CHRM3P20309 590 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 GPX3P22352 226 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 CDKN2DP55273 166 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 DNASE1L3Q13609 305 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 GEN1Q17RS7 908 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 CCNYL2Q5T2Q4 361 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 TMEM207Q6UWW9 146 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 RANBP10Q6VN20 620 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 C14orf80Q86SX3 495 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 SDR16C5Q8N3Y7 309 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 MYLPFQ96A32 169 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 SMARCD1Q96GM5 515 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 CSF3RQ99062 836 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 TP63Q9H3D4 680 aaPredicted RBP15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 MAP10Q9P2G4 905 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 DNAH12Q6ZR08 3092 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 DHRS12A0PJE2 317 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 PAGE1O75459 146 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 MOCS2O96007 188 aaPredicted RBP15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 IMPDH1P20839 514 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 BDNFP23560 247 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 CAPGP40121 348 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 CLCN5P51795 746 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 CLCNKBP51801 687 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 IFITM3Q01628 133 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 ZNF33AQ06730 810 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 MAP2K5Q13163 448 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 MFSD10Q14728 455 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 ACAP2Q15057 778 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 ZNF678Q5SXM1 525 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 HACD2Q6Y1H2 254 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 TLK2Q86UE8 772 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 SLC22A9Q8IVM8 553 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 KIAA2013Q8IYS2 634 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 C3orf58Q8NDZ4 430 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 BPIFB6Q8NFQ5 453 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 OR6P1Q8NGX9 317 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 TXNDC15Q96J42 360 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 CCM2LQ9NUG4 571 aaPredicted RBP15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 MPP6Q9NZW5 540 aa15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 IFT80Q9P2H3 777 aaPredicted RBP15.89■□□□□ 0.13
CHMP1A-201ENST00000397901 TRIP12Q14669 1992 aaPredicted RBP15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 OR51F1A6NGY5 319 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 LRRC14BA6NHZ5 514 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 SLC22A1O15245 554 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 CAPN3P20807 821 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 OXTRP30559 389 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 POLR2IP36954 125 aaKnown RBP15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 LHX1P48742 406 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 MAXP61244 160 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 UNC50Q53HI1 259 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 KIAA0408Q6ZU52 694 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 DHRSXQ8N5I4 330 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 Q8N9G6 341 aaPredicted RBP15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 OR52K2Q8NGK3 314 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 TSPAN17Q96FV3 270 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 MAGED4Q96JG8 741 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 RPL10LQ96L21 214 aaKnown RBP15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 UBXN10Q96LJ8 280 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 PRKD2Q9BZL6 878 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 QPCTLQ9NXS2 382 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 KLQ9UEF7 1012 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 NUDT5Q9UKK9 219 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 PRELID1Q9Y255 219 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 VWA7Q9Y334 891 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 TTC24A2A3L6 582 aaPredicted RBP15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 HAS3O00219 553 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 SIX3O95343 332 aaPredicted RBP15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 SERPINB1P30740 379 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 ITKQ08881 620 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 TRIM32Q13049 653 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 GRB7Q14451 532 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 ATP6AP1Q15904 470 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 GTF2IRD2BQ6EKJ0 949 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 GTF2IRD2Q86UP8 949 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 OFCC1Q8IZS5 231 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 SCAMP5Q8TAC9 235 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 ROPN1LQ96C74 230 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 VMP1Q96GC9 406 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 YME1L1Q96TA2 773 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 ATP13A3Q9H7F0 1226 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 MARCH7Q9H992 704 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 CRYL1Q9Y2S2 319 aa15.88■□□□□ 0.13
CHMP1A-201ENST00000397901 FNDC1Q4ZHG4 1894 aaPredicted RBP15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 ANGPT2O15123 496 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 DEAF1O75398 565 aaPredicted RBP15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 BMPR1AP36894 532 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 FOXA1P55317 472 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 SH3BP2P78314 561 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms