RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 SEC14L1Q92503 715 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 BORCS5Q969J3 196 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 ADI1Q9BV57 179 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 SPRTNQ9H040 489 aaPredicted RBP10.71□□□□□ -0.69
CCDC40-204ENST00000397545 TCAF1Q9Y4C2 921 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 LYVE1Q9Y5Y7 322 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 PMM2O15305 246 aa10.71□□□□□ -0.7
CCDC40-204ENST00000397545 OR4F21O95013 312 aa10.71□□□□□ -0.7
CCDC40-204ENST00000397545 CES1P23141 567 aa10.71□□□□□ -0.7
CCDC40-204ENST00000397545 ITPKAP23677 461 aa10.71□□□□□ -0.7
CCDC40-204ENST00000397545 CCR10P46092 362 aa10.71□□□□□ -0.7
CCDC40-204ENST00000397545 HSPA7P48741 367 aa10.71□□□□□ -0.7
CCDC40-204ENST00000397545 TUFMP49411 452 aaKnown RBP10.71□□□□□ -0.7
CCDC40-204ENST00000397545 POLR2JP52435 117 aaKnown RBP10.71□□□□□ -0.7
CCDC40-204ENST00000397545 CLCQ05315 142 aa10.71□□□□□ -0.7
CCDC40-204ENST00000397545 DPYSQ14117 519 aa10.71□□□□□ -0.7
CCDC40-204ENST00000397545 OR7D4Q8NG98 312 aa10.71□□□□□ -0.7
CCDC40-204ENST00000397545 SCAMP5Q8TAC9 235 aa10.71□□□□□ -0.7
CCDC40-204ENST00000397545 FZD8Q9H461 694 aa10.71□□□□□ -0.7
CCDC40-204ENST00000397545 TMCO1Q9UM00 188 aa10.71□□□□□ -0.7
CCDC40-204ENST00000397545 SNX6Q9UNH7 406 aa10.71□□□□□ -0.7
CCDC40-204ENST00000397545 CNTN6Q9UQ52 1028 aa10.71□□□□□ -0.7
CCDC40-204ENST00000397545 TNS1Q9HBL0 1735 aaKnown RBP10.7□□□□□ -0.7
CCDC40-204ENST00000397545 NOS3P29474 1203 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 CRYBB1P53674 252 aaPredicted RBP10.7□□□□□ -0.7
CCDC40-204ENST00000397545 SRP54P61011 504 aaKnown RBP10.7□□□□□ -0.7
CCDC40-204ENST00000397545 ARHGAP15Q53QZ3 475 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 SFT2D3Q587I9 215 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 SLC7A5P2Q9GIP4 190 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 FANCEQ9HB96 536 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 AMBNQ9NP70 447 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 GMIPQ9P107 970 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 DOCK5Q9H7D0 1870 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 MYOCOSA0A1B0GUC4 107 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 H3BSA7 217 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 EI24O14681 340 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 TYROBPO43914 113 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 TBL1XO60907 577 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 COL6A1P12109 1028 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 GRK4P32298 578 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 SLC1A2P43004 574 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 XKR6Q5GH73 641 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 HDDC2Q7Z4H3 204 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 COL26A1Q96A83 441 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 BBS4Q96RK4 519 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 E9PAM4 449 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 H0YC42 278 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 PSMD11O00231 422 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 PRMT5O14744 637 aaPredicted RBP10.7□□□□□ -0.7
CCDC40-204ENST00000397545 NBNO60934 754 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 CBFA2T3O75081 653 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 DLDP09622 509 aaKnown RBP10.7□□□□□ -0.7
CCDC40-204ENST00000397545 IL12RB1P42701 662 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 MTPNP58546 118 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 SLC25A11Q02978 314 aaKnown RBP10.7□□□□□ -0.7
CCDC40-204ENST00000397545 DPYSL2Q16555 572 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 ZSWIM7Q19AV6 140 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 BRMS1LQ5PSV4 323 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 RNF19BQ6ZMZ0 732 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 LRRC49Q8IUZ0 686 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 NIPA2Q8N8Q9 360 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 OR10A6Q8NH74 314 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 PHF10Q8WUB8 498 aaKnown RBP10.7□□□□□ -0.7
CCDC40-204ENST00000397545 PSMG2Q969U7 264 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 SLC47A1Q96FL8 570 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 PIWIL1Q96J94 861 aaKnown RBP10.7□□□□□ -0.7
CCDC40-204ENST00000397545 FEM1AQ9BSK4 669 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 CHID1Q9BWS9 393 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 ATG10Q9H0Y0 220 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 TRMT13Q9NUP7 481 aaKnown RBP10.7□□□□□ -0.7
CCDC40-204ENST00000397545 FETUBQ9UGM5 382 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 DNMT3LQ9UJW3 386 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 RAB23Q9ULC3 237 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 CNOT6Q9ULM6 557 aaKnown RBP10.7□□□□□ -0.7
CCDC40-204ENST00000397545 LRRC42Q9Y546 428 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.7□□□□□ -0.7
CCDC40-204ENST00000397545 TMCC2O75069 709 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 PABPC1P11940 636 aaKnown RBP10.7□□□□□ -0.7
CCDC40-204ENST00000397545 PAICSP22234 425 aaKnown RBP10.7□□□□□ -0.7
CCDC40-204ENST00000397545 DAOAP59103 153 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 SEMG2Q02383 582 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 NOGQ13253 232 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 PPIL2Q13356 520 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 KCNJ11Q14654 390 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 C15orf39Q6ZRI6 1047 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 HFE2Q6ZVN8 426 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 TRIM48Q8IWZ4 208 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 CPNE9Q8IYJ1 553 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 RHOBTB2Q9BYZ6 727 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 EPB41L4BQ9H329 900 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 SERHL2Q9H4I8 314 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 IPPKQ9H8X2 491 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 SERHLQ9NQF3 203 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 PIGVQ9NUD9 493 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 KLHL28Q9NXS3 571 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 AHSPQ9NZD4 102 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 EIF2B4Q9UI10 523 aaKnown RBP10.7□□□□□ -0.7
CCDC40-204ENST00000397545 SH3GLB1Q9Y371 365 aa10.7□□□□□ -0.7
CCDC40-204ENST00000397545 E7ENX8 843 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 THRBP10828 461 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms