RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ITGALP20701 1170 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 CNTFP26441 200 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 ABCG1P45844 678 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 TPMTP51580 245 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 LIMK2P53671 638 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 SFSWAPQ12872 951 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 GPS2Q13227 327 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 ZNF765Q7L2R6 523 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 ERMP1Q7Z2K6 904 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 ZNF398Q8TD17 642 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 SCAMP4Q969E2 229 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 ZC3H10Q96K80 434 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 ATP6V1G3Q96LB4 118 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 TCF12Q99081 682 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 TPSD1Q9BZJ3 242 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 ARRDC1-AS1Q9H2J1 176 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 RHOJQ9H4E5 214 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 SMOC1Q9H4F8 434 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 FAM83DQ9H4H8 585 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 ASB8Q9H765 288 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 ITM2CQ9NQX7 267 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 NCKAP1Q9Y2A7 1128 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 PLXND1Q9Y4D7 1925 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 KRT38O76015 456 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 RECQL5O94762 991 aaPredicted RBP16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 IGLV3-19P01714 112 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 ITGA2BP08514 1039 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 SNRPAP09012 282 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 UGT1A6P19224 532 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 BCKDHBP21953 392 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 UGT1A1P22309 533 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 UGT1A4P22310 534 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 SPRP35270 261 aaPredicted RBP16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 UGT1A3P35503 534 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 UGT1A5P35504 534 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 CD151P48509 253 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 BMPR2Q13873 1038 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 PUM1Q14671 1186 aaKnown RBP eCLIP16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 CSRP2Q16527 193 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 GPR33Q49SQ1 333 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 AARS2Q5JTZ9 985 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 PLA2G2CQ5R387 149 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 MROH9Q5TGP6 573 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 CNSTQ6PJW8 725 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 PRR23CQ6ZRP0 262 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 TAOK1Q7L7X3 1001 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 SDCCAG8Q86SQ7 713 aaPredicted RBP16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 FRMD1Q8N878 549 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 OR14C36Q8NHC7 312 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 VPS39Q96JC1 886 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 RIOK2Q9BVS4 552 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 PREBQ9HCU5 417 aa16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 INTS10Q9NVR2 710 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 BCCIPQ9P287 314 aaKnown RBP eCLIP16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 ZFR2Q9UPR6 939 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-205ENST00000397406 IGLON5A6NGN9 336 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 TRIM49D1C9J1S8 452 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 LZTS3O60299 673 aaPredicted RBP16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 LRP3O75074 770 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 KRT37O76014 449 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 PCDH8O95206 1070 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 EPN2O95208 641 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 TTPAP49638 278 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 ITGA9Q13797 1035 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 AGERQ15109 404 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 SF3A2Q15428 464 aaKnown RBP16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 ATP13A5Q4VNC0 1218 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 HSP90B2PQ58FF3 399 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 LGSNQ5TDP6 509 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 SEL1L3Q68CR1 1132 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 KCTD16Q68DU8 428 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 KIAA1161Q6NSJ0 714 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 CERS6Q6ZMG9 384 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 TAS2R42Q7RTR8 314 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 TRABD2AQ86V40 505 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 CNPY4Q8N129 248 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 TRAM1L1Q8N609 369 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 TSTD1Q8NFU3 115 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 LPGAT1Q92604 370 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.8■□□□□ 0.283e-8■■■■□ 21.6
TSPAN4-205ENST00000397406 MTBPQ96DY7 904 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 NUS1Q96E22 293 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 ATXN7L3BQ96GX2 97 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 GPR22Q99680 433 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 ZSCAN5AQ9BUG6 496 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 SPATA16Q9BXB7 569 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 STMN4Q9H169 189 aaPredicted RBP16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 KDM4CQ9H3R0 1056 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 TMPRSS11EQ9UL52 423 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 NOVA2Q9UNW9 492 aaKnown RBP16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 MTO1Q9Y2Z2 717 aaKnown RBP16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 PIKFYVEQ9Y2I7 2098 aa16.8■□□□□ 0.28
TSPAN4-205ENST00000397406 A0A1W2PPM1 405 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 FADS2P1A8MWK0 482 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 HMGB1P1B2RPK0 211 aaPredicted RBP16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 TM7SF2O76062 418 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 KRT15P19012 456 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 PMLP29590 882 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 ATP5DP30049 168 aa16.79■□□□□ 0.28
TSPAN4-205ENST00000397406 DPTQ07507 201 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms