RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 PIH1D2Q8WWB5 315 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 SCAMP4Q969E2 229 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 PNPLA2Q96AD5 504 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 ELMO2Q96JJ3 720 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 C5orf34Q96MH7 638 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 TGM7Q96PF1 710 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 FCRL4Q96PJ5 515 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 PCDHB18PQ96TA0 734 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 EIF3CQ99613 913 aaKnown RBP8.33□□□□□ -1.08
SCFD1-202ENST00000396629 CNPY3Q9BT09 278 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 RMI1Q9H9A7 625 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 AKIRIN1Q9H9L7 192 aaPredicted RBP8.33□□□□□ -1.08
SCFD1-202ENST00000396629 NOD2Q9HC29 1040 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 SLAMF7Q9NQ25 335 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 GPATCH2LQ9NWQ4 482 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 CNOT6Q9ULM6 557 aaKnown RBP8.33□□□□□ -1.08
SCFD1-202ENST00000396629 KCNK6Q9Y257 313 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 PRKAB1Q9Y478 270 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 SLC30A1Q9Y6M5 507 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 OTOGQ6ZRI0 2925 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 C2CD3Q4AC94 2353 aa8.33□□□□□ -1.08
SCFD1-202ENST00000396629 A0A0U1RQS6 177 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 ARGFXA6NJG6 315 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 SNX2O60749 519 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 GFPT2O94808 682 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 UBXN7O94888 489 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 TIAF1O95411 115 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 PEX11BO96011 259 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 CALB1P05937 261 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 CTPS1P17812 591 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 ERCC2P18074 760 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 LPOP22079 712 aaPredicted RBP8.32□□□□□ -1.08
SCFD1-202ENST00000396629 RPS18P62269 152 aaKnown RBP8.32□□□□□ -1.08
SCFD1-202ENST00000396629 NR6A1Q15406 480 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 CA9Q16790 459 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 PPP1R15BQ5SWA1 713 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 CYB5D1Q6P9G0 228 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 TMEM26Q6ZUK4 368 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 RAVER1Q8IY67 606 aaKnown RBP8.32□□□□□ -1.08
SCFD1-202ENST00000396629 NPWQ8N729 165 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 C19orf60Q96EN9 201 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 PLEKHG4BQ96PX9 1271 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 MGME1Q9BQP7 344 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 TUBGCP2Q9BSJ2 902 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 MFRPQ9BY79 579 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 VPS16Q9H269 839 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 SEMA5BQ9P283 1151 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 AP4E1Q9UPM8 1137 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 CROCCQ5TZA2 2017 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 FZD6O60353 706 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 ATP1A1P05023 1023 aaKnown RBP8.32□□□□□ -1.08
SCFD1-202ENST00000396629 ACP5P13686 325 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 ZNF30P17039 623 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 TYRP1P17643 537 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 NELFEP18615 380 aaKnown RBP8.32□□□□□ -1.08
SCFD1-202ENST00000396629 NSFP46459 744 aaKnown RBP8.32□□□□□ -1.08
SCFD1-202ENST00000396629 STC1P52823 247 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 RPL7AP62424 266 aaKnown RBP8.32□□□□□ -1.08
SCFD1-202ENST00000396629 IL10RAQ13651 578 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 ZNF235Q14590 738 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 CLEC16AQ2KHT3 1053 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 ZRANB3Q5FWF4 1079 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 ARMC12Q5T9G4 340 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 LRRC66Q68CR7 880 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 RFX8Q6ZV50 586 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 MON1BQ7L1V2 547 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 TP53INP2Q8IXH6 220 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 RHOT1Q8IXI2 618 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 ADAMTS17Q8TE56 1095 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 MOCOSQ96EN8 888 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 WDR24Q96S15 920 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 KCTD15Q96SI1 283 aaPredicted RBP8.32□□□□□ -1.08
SCFD1-202ENST00000396629 RIOK2Q9BVS4 552 aaKnown RBP8.32□□□□□ -1.08
SCFD1-202ENST00000396629 GANQ9H2C0 597 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 DHX35Q9H5Z1 703 aaKnown RBP8.32□□□□□ -1.08
SCFD1-202ENST00000396629 LUZP4Q9P127 313 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 EPHA6Q9UF33 1036 aa8.32□□□□□ -1.08
SCFD1-202ENST00000396629 FARSAQ9Y285 508 aaKnown RBP8.32□□□□□ -1.08
SCFD1-202ENST00000396629 SSU72P8A0A1W2PR75 194 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 DAPK3O43293 454 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 HNRNPRO43390 633 aaKnown RBP8.31□□□□□ -1.08
SCFD1-202ENST00000396629 KRT86O43790 486 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 KIF1CO43896 1103 aaKnown RBP8.31□□□□□ -1.08
SCFD1-202ENST00000396629 PDHA1P08559 390 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 PRF1P14222 555 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 AMD1P17707 334 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 GRNP28799 593 aaKnown RBP8.31□□□□□ -1.08
SCFD1-202ENST00000396629 SLC19A1P41440 591 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 PTGIRP43119 386 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 HCAR3P49019 387 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 RPS15P62841 145 aaKnown RBP8.31□□□□□ -1.08
SCFD1-202ENST00000396629 OGDHQ02218 1023 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 ERMARDQ5T6L9 678 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 CACHD1Q5VU97 1274 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 PWWP2BQ6NUJ5 590 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 DNAJC24Q6P3W2 148 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 FAM199XQ6PEV8 388 aaPredicted RBP8.31□□□□□ -1.08
SCFD1-202ENST00000396629 BPHLQ86WA6 291 aaPredicted RBP8.31□□□□□ -1.08
SCFD1-202ENST00000396629 GLIS1Q8NBF1 620 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 FDCSPQ8NFU4 85 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms