RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 YME1L1Q96TA2 773 aa11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 ACOX2Q99424 681 aa11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 TTLL2Q9BWV7 592 aa11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 EIF2B4Q9UI10 523 aaKnown RBP11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 TSC2P49815 1807 aa11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 PPP6CO00743 305 aa11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 SEC24AO95486 1093 aa11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 IGSF6O95976 241 aa11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 PTGER3P43115 390 aa11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 NAA20P61599 178 aa11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 LHX8Q68G74 356 aa11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 TXNDC8Q6A555 127 aa11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.48□□□□□ -0.578e-8■■□□□ 13.8
PDXDC1-202ENST00000396410 FAM126BQ8IXS8 530 aa11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 DIS3LQ8TF46 1054 aaKnown RBP11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 MAELQ96JY0 434 aaKnown RBP11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 PRICKLE1Q96MT3 831 aaPredicted RBP11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 ZFYVE1Q9HBF4 777 aa11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 EGFL7Q9UHF1 273 aa11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 ZNF711Q9Y462 761 aa11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 BACE2Q9Y5Z0 518 aa11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 MYO16Q9Y6X6 1858 aa11.48□□□□□ -0.57
PDXDC1-202ENST00000396410 A0A0U1RQS6 177 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 GSTA4O15217 222 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 ESR1P03372 595 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 LINGO3P0C6S8 592 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 ZDHHC11BP0C7U3 371 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 HSPA1AP0DMV8 641 aaKnown RBP11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 HSPA1BP0DMV9 641 aaKnown RBP11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 PSMC3P17980 439 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 RECQLP46063 649 aaPredicted RBP11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 PPP3CCP48454 512 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 SGSHP51688 502 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 ZNF140P52738 457 aaPredicted RBP11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 ECT2LQ008S8 904 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 AMIGO2Q86SJ2 522 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 CAMK1DQ8IU85 385 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 TRIML2Q8N7C3 387 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 HHIPL1Q96JK4 782 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 BTBD9Q96Q07 612 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 HOPXQ9BPY8 73 aaPredicted RBP11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 RNF38Q9H0F5 515 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 PIF1Q9H611 641 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 RIMKLBQ9ULI2 386 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 TMCO1Q9UM00 188 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 TBC1D30Q9Y2I9 924 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 V9GYQ6 96 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 A6NHS1 94 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 IQCF5A8MTL0 148 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 H3BMM5 538 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 PRAMEF1O95521 474 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 PENKP01210 267 aaPredicted RBP11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 TRAF2Q12933 501 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 MAP7Q14244 749 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 IL23RQ5VWK5 629 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 SLC30A9Q6PML9 568 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 ZBTB49Q6ZSB9 765 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 LYSMD3Q7Z3D4 306 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 BCL7CQ8WUZ0 217 aaPredicted RBP11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 ROPN1LQ96C74 230 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 PKP2Q99959 881 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 ZBED2Q9BTP6 218 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 PDFQ9HBH1 243 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 GNPTGQ9UJJ9 305 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 TNPO3Q9Y5L0 923 aaKnown RBP11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 AK5Q9Y6K8 562 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 UBFD1O14562 309 aaKnown RBP11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 CLGNO14967 610 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 DNAJA2O60884 412 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 OR4F21O95013 312 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 KLKB1P03952 638 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 SOD2P04179 222 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 UROSP10746 265 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 XPAP23025 273 aaPredicted RBP11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 AGTR2P50052 363 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 SLC14A2Q15849 920 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 TTLL9Q3SXZ7 439 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 C6orf10Q5SRN2 563 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 MILR1Q7Z6M3 343 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 ADAMTSL2Q86TH1 951 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 KCTD14Q9BQ13 255 aaPredicted RBP11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 TNFRSF12AQ9NP84 129 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 GALPQ9UBC7 116 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 SUCOQ9UBS9 1254 aaKnown RBP11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 C15orf38-AP3S2A0A0A6YYH1 394 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 SERPINA4P29622 427 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 FOXA1P55317 472 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 NFKB2Q00653 900 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 CAP1Q01518 475 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 PLOD1Q02809 727 aaPredicted RBP11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 GRB7Q14451 532 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 ARPINQ7Z6K5 226 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 FAM126AQ9BYI3 521 aaPredicted RBP11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 CIPCQ9C0C6 399 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 FAM192AQ9GZU8 254 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 TNKS2Q9H2K2 1166 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 ATP13A3Q9H7F0 1226 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 CFAP97Q9P2B7 532 aa11.47□□□□□ -0.57
PDXDC1-202ENST00000396410 PCDHGA7Q9Y5G6 932 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms