RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 PIM1P11309 404 aaPredicted RBP16.66■□□□□ 0.26
NUP50-202ENST00000396096 UQCRBP14927 111 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 LBPP18428 481 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 CSNK1DP48730 415 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 MNX1P50219 401 aaPredicted RBP16.66■□□□□ 0.26
NUP50-202ENST00000396096 APLP1P51693 650 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 ZXDBP98169 803 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 CDH18Q13634 790 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 ARMC12Q5T9G4 340 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 FAM219BQ5XKK7 198 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 OR52E8Q6IFG1 317 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 OGFOD2Q6N063 350 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 UGT3A1Q6NUS8 523 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 PAOXQ6QHF9 649 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 CERS6Q6ZMG9 384 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 CMTR2Q8IYT2 770 aaKnown RBP16.66■□□□□ 0.26
NUP50-202ENST00000396096 ARL14EPQ8N8R7 260 aaPredicted RBP16.66■□□□□ 0.26
NUP50-202ENST00000396096 GRIN3AQ8TCU5 1115 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 WFDC5Q8TCV5 224 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 PIH1D2Q8WWB5 315 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 MYO19Q96H55 970 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 SPAG4Q9NPE6 437 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 DLGAP2Q9P1A6 1054 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 TMEM181Q9P2C4 612 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 CROTQ9UKG9 612 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 PCTPQ9UKL6 214 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 PCDHB9Q9Y5E1 797 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 PCDHB1Q9Y5F3 818 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 CPQQ9Y646 472 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 BRCA2P51587 3418 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 ABHD14A-ACY1A0A1B0GW23 586 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 MLYCDO95822 493 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 C8BP07358 591 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 PRR35P0CG20 571 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 CCL5P13501 91 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 HDCP19113 662 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 AQP4P55087 323 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 PTPRRQ15256 657 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 ATXN7L2Q5T6C5 722 aaPredicted RBP16.65■□□□□ 0.26
NUP50-202ENST00000396096 RNF148Q8N7C7 305 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 CATSPER1Q8NEC5 780 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 OR9I1Q8NGQ6 314 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 EID2BQ96D98 161 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 LINGO1Q96FE5 620 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 C2orf49Q9BVC5 232 aaPredicted RBP16.65■□□□□ 0.26
NUP50-202ENST00000396096 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.65■□□□□ 0.26
NUP50-202ENST00000396096 SPATS2LQ9NUQ6 558 aaKnown RBP16.65■□□□□ 0.26
NUP50-202ENST00000396096 EPS15L1Q9UBC2 864 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 POLG2Q9UHN1 485 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 ASB3Q9Y575 518 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.65■□□□□ 0.26
NUP50-202ENST00000396096 MT-CO1P00395 513 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 LYNP07948 512 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 RPS3P23396 243 aaKnown RBP eCLIP16.65■□□□□ 0.26
NUP50-202ENST00000396096 MSX2P35548 267 aaPredicted RBP16.65■□□□□ 0.26
NUP50-202ENST00000396096 CLCN7P51798 805 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 HK3P52790 923 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 GEN1Q17RS7 908 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 LRRC36Q1X8D7 754 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 TXNDC8Q6A555 127 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 RETSATQ6NUM9 610 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 TICAM1Q8IUC6 712 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 MIER2Q8N344 545 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 CPXM2Q8N436 756 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 PCYOX1LQ8NBM8 494 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 RIN3Q8TB24 985 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 EEF1AKMT1Q8WVE0 214 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.65■□□□□ 0.26
NUP50-202ENST00000396096 ACDQ96AP0 544 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 DUS3LQ96G46 650 aaKnown RBP16.65■□□□□ 0.26
NUP50-202ENST00000396096 KLHL32Q96NJ5 620 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 KCNA7Q96RP8 456 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 GPR63Q9BZJ6 419 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 RNF208Q9H0X6 261 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 SEMA4BQ9NPR2 832 aaPredicted RBP16.65■□□□□ 0.26
NUP50-202ENST00000396096 SDR39U1Q9NRG7 319 aaPredicted RBP16.65■□□□□ 0.26
NUP50-202ENST00000396096 MRPL17Q9NRX2 175 aaKnown RBP16.65■□□□□ 0.26
NUP50-202ENST00000396096 ZNF510Q9Y2H8 683 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 NDUFAF1Q9Y375 327 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 DHRS7Q9Y394 339 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 DTNAQ9Y4J8 743 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 SLC30A1Q9Y6M5 507 aa16.65■□□□□ 0.26
NUP50-202ENST00000396096 A0A0J9YYE9 177 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 A0A1B0GTL3 188 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 GOLGA8CPA6NN73 597 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 PRMT5O14744 637 aaPredicted RBP16.64■□□□□ 0.25
NUP50-202ENST00000396096 HTRA2O43464 458 aaPredicted RBP16.64■□□□□ 0.25
NUP50-202ENST00000396096 LILRB3O75022 631 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 PRAMEF12O95522 483 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 ESRRBO95718 433 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 MAPK8P45983 427 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 GRIK2Q13002 908 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 GRB7Q14451 532 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 XKR7Q5GH72 579 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 COQ5Q5HYK3 327 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 SAMD4BQ5PRF9 694 aaKnown RBP16.64■□□□□ 0.25
NUP50-202ENST00000396096 RARS2Q5T160 578 aaKnown RBP16.64■□□□□ 0.25
NUP50-202ENST00000396096 MPP7Q5T2T1 576 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 HTR3DQ70Z44 454 aa16.64■□□□□ 0.25
NUP50-202ENST00000396096 TAS2R42Q7RTR8 314 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms