RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TSSK3Q96PN8 268 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 HEPHQ9BQS7 1158 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 FAM83DQ9H4H8 585 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 LRTM1Q9HBL6 345 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 ZDHHC4Q9NPG8 344 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 TMEM138Q9NPI0 162 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 SLC35C2Q9NQQ7 365 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 EGFL7Q9UHF1 273 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 MAFBQ9Y5Q3 323 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 OR5F1O95221 314 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 PRAMEF1O95521 474 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 EOMESO95936 686 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 ELF3P78545 371 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-203ENST00000394872 CYP4F8P98187 520 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 OMA1Q96E52 524 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 NARS2Q96I59 477 aaKnown RBP10.33□□□□□ -0.76
COL4A6-203ENST00000394872 NEUROD4Q9HD90 331 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-203ENST00000394872 C8AP07357 584 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 CYP4B1P13584 511 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 CCNCP24863 283 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 HTR7P34969 479 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 CCR3P51677 355 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 OR7D4Q8NG98 312 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 PCDHB18PQ96TA0 734 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 IL12RB2Q99665 862 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 FAM237AA0A1B0GTK4 181 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 RCCD1A6NED2 376 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 SLC31A1O15431 190 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 SNX3O60493 162 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 SNAP91O60641 907 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 RBBP4Q09028 425 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 USP4Q13107 963 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 SUZ12Q15022 739 aaKnown RBP10.33□□□□□ -0.76
COL4A6-203ENST00000394872 ZNF730Q6ZMV8 503 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 RTL4Q6ZR62 310 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 DHDDSQ86SQ9 333 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 KREMEN2Q8NCW0 462 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 LCN9Q8WX39 176 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 GPR21Q99679 349 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 KCNS3Q9BQ31 491 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 XKRYO14609 159 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 FPGTO14772 594 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 INSIG1O15503 277 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 YBEYP58557 167 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-203ENST00000394872 ACTR3P61158 418 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 CAMK1Q14012 370 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 TTC27Q6P3X3 843 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 EXOSC8Q96B26 276 aaKnown RBP10.33□□□□□ -0.76
COL4A6-203ENST00000394872 NPAS2Q99743 824 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 PIGUQ9H490 435 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 TMEM27Q9HBJ8 222 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 CCDC177Q9NQR7 707 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-203ENST00000394872 ADGRE2Q9UHX3 823 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 DHRS12A0PJE2 317 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 UBE2QL1A1L167 161 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 G3V2T6 193 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 GPR25O00155 361 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 CLDN9O95484 217 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 HID1Q8IV36 788 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 UNC5BQ8IZJ1 945 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 HDDC3Q8N4P3 179 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 C1orf127Q8N9H9 656 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 TRPV3Q8NET8 790 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 SEC14L3Q9UDX4 400 aa10.33□□□□□ -0.76
COL4A6-203ENST00000394872 A0A0G2JLL6 359 aaPredicted RBP10.32□□□□□ -0.76
COL4A6-203ENST00000394872 A0A0J9YYE9 177 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 ALOX15BO15296 676 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 OR1F1O43749 312 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 TPSB2P20231 275 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 MMP8P22894 467 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 PTPN5P54829 565 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 PRMT2P55345 433 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 LSM3P62310 102 aaKnown RBP10.32□□□□□ -0.76
COL4A6-203ENST00000394872 FOXM1Q08050 763 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 LARS2Q15031 903 aaKnown RBP10.32□□□□□ -0.76
COL4A6-203ENST00000394872 TPSAB1Q15661 275 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 PRRT2Q7Z6L0 340 aaPredicted RBP10.32□□□□□ -0.76
COL4A6-203ENST00000394872 TMC8Q8IU68 726 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 CADM2Q8N3J6 435 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 SRFBP1Q8NEF9 429 aaKnown RBP10.32□□□□□ -0.76
COL4A6-203ENST00000394872 ZCCHC10Q8TBK6 192 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 PTCD2Q8WV60 388 aaKnown RBP10.32□□□□□ -0.76
COL4A6-203ENST00000394872 PIH1D2Q8WWB5 315 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 TRNT1Q96Q11 434 aaKnown RBP10.32□□□□□ -0.76
COL4A6-203ENST00000394872 C11orf84Q9BUA3 381 aaPredicted RBP10.32□□□□□ -0.76
COL4A6-203ENST00000394872 TRPS1Q9UHF7 1281 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 BTBD3Q9Y2F9 522 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 SNX10Q9Y5X0 201 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 A0A1W2PPM1 405 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 SASH3O75995 380 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 DBTP11182 482 aaKnown RBP10.32□□□□□ -0.76
COL4A6-203ENST00000394872 ICAM3P32942 547 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 GNPDA1P46926 289 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 UBXN11Q5T124 520 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 MED27Q6P2C8 311 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 CHST15Q7LFX5 561 aaPredicted RBP10.32□□□□□ -0.76
COL4A6-203ENST00000394872 LDB1Q86U70 411 aaPredicted RBP10.32□□□□□ -0.76
COL4A6-203ENST00000394872 KLHL32Q96NJ5 620 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 ATG10Q9H0Y0 220 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms