RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 ZNF431Q8TF32 576 aaPredicted RBP13.35□□□□□ -0.27
USP49-203ENST00000394253 MAP3K6O95382 1288 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 ASLP04424 464 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 CSF1RP07333 972 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 ACO1P21399 889 aaKnown RBP13.35□□□□□ -0.27
USP49-203ENST00000394253 SSX2Q16385 188 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 METTL3Q86U44 580 aaKnown RBP13.35□□□□□ -0.27
USP49-203ENST00000394253 CYP4X1Q8N118 509 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 OR10H4Q8NGA5 316 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 COQ8BQ96D53 544 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 GJB4Q9NTQ9 266 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 HBP1O60381 514 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 FABP3P05413 133 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 MMP13P45452 471 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 MAPK8P45983 427 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 SLC13A2Q13183 592 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 AP5B1Q2VPB7 878 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 GALNT5Q7Z7M9 940 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 ZNF565Q8N9K5 539 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 TRMOQ9BU70 441 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 CD320Q9NPF0 282 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 AGPAT3Q9NRZ7 376 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 METP08581 1390 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 F5H6K3 240 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 SNX3O60493 162 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 PROSCO94903 275 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 GPIP06744 558 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 SLC5A3P53794 718 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 MARSP56192 900 aaKnown RBP13.35□□□□□ -0.27
USP49-203ENST00000394253 KLRC3Q07444 240 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 KLHL26Q53HC5 615 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 FIGNQ5HY92 759 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 CIAPIN1Q6FI81 312 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 ZCCHC23Q6ZST2 131 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 PCDH10Q9P2E7 1040 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 SCP2D1Q9UJQ7 156 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 SPEF2Q9C093 1822 aa13.35□□□□□ -0.27
USP49-203ENST00000394253 BCAS1O75363 584 aaPredicted RBP13.34□□□□□ -0.27
USP49-203ENST00000394253 HGFP14210 728 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 PRR5P85299 388 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 MOGSQ13724 837 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 GNMTQ14749 295 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 TBRG1Q3YBR2 411 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 KIF18BQ86Y91 864 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 EIF5A2Q9GZV4 153 aaKnown RBP13.34□□□□□ -0.27
USP49-203ENST00000394253 H3BUI4 141 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 VNN2O95498 520 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 PTPN9P43378 593 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 TKFCQ3LXA3 575 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 LIN52Q52LA3 116 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 FAM46CQ5VWP2 391 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 MOB2Q70IA6 237 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 ZBTB46Q86UZ6 589 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 SATL1Q86VE3 508 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 SLC7A6OSQ96CW6 309 aaPredicted RBP13.34□□□□□ -0.27
USP49-203ENST00000394253 POLR1EQ9GZS1 481 aaKnown RBP13.34□□□□□ -0.27
USP49-203ENST00000394253 BIN3Q9NQY0 253 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 MYMKA6NI61 221 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 ADH6P28332 368 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 ST3GAL4Q11206 333 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 C6orf52Q5T4I8 152 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 FAM83AQ86UY5 434 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 SLC47A2Q86VL8 602 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 GALNT12Q8IXK2 581 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 TOMM5Q8N4H5 51 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 CEP295NLQ96MC4 621 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 TMEM121BQ9BXQ6 578 aaPredicted RBP13.34□□□□□ -0.27
USP49-203ENST00000394253 TBC1D17Q9HA65 648 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 CXorf21Q9HAI6 301 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 ADGRL3Q9HAR2 1447 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 PLD2O14939 933 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 CYB5R4Q7L1T6 521 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 ERI1Q8IV48 349 aaKnown RBP13.34□□□□□ -0.27
USP49-203ENST00000394253 MCEMP1Q8IX19 187 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 HASPINQ8TF76 798 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 CHRAC1Q9NRG0 131 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 PRKAB1Q9Y478 270 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 ZNF311Q5JNZ3 666 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 ARMC12Q5T9G4 340 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 LRRN1Q6UXK5 716 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 SPATA19Q7Z5L4 167 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 OR2T12Q8NG77 320 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 ITGA11Q9UKX5 1188 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 PRR12Q9ULL5 1215 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 NOP16Q9Y3C1 178 aaKnown RBP13.34□□□□□ -0.27
USP49-203ENST00000394253 GPATCH8Q9UKJ3 1502 aaKnown RBP13.34□□□□□ -0.27
USP49-203ENST00000394253 UGT2B4P06133 528 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 SEMA3AQ14563 771 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 FBXO47Q5MNV8 452 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 OR7D4Q8NG98 312 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 NPTXRO95502 500 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 ABHD2P08910 425 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 CLCN5P51795 746 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 BCL2L1Q07817 233 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 ZNF792Q3KQV3 632 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 SPIN3Q5JUX0 258 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 LDLRAP1Q5SW96 308 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 SLC30A10Q6XR72 485 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 ZNF627Q7L945 461 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 TMEM27Q9HBJ8 222 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms