RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 DOK1Q99704 481 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 UPF3AQ9H1J1 476 aaKnown RBP9.91□□□□□ -0.82
PSEN1-204ENST00000394164 CSNK1G1Q9HCP0 422 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 TBC1D14Q9P2M4 693 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 TSR3Q9UJK0 312 aaKnown RBP9.91□□□□□ -0.82
PSEN1-204ENST00000394164 VPS28Q9UK41 221 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 ACOT9Q9Y305 439 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 DLX3O60479 287 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 PRSS56P0CW18 603 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 CYBAP13498 195 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 IL7RP16871 459 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 STMN1P16949 149 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 CAPRIN1Q14444 709 aaKnown RBP9.91□□□□□ -0.82
PSEN1-204ENST00000394164 ZNF846Q147U1 533 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 RGMBQ6NW40 437 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 SLCO6A1Q86UG4 719 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 RTN4RL1Q86UN2 441 aaPredicted RBP9.91□□□□□ -0.82
PSEN1-204ENST00000394164 DEPDC4Q8N2C3 294 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 EXOC2Q96KP1 924 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 ING2Q9H160 280 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 PARVBQ9HBI1 364 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 ABCC13Q9NSE7 274 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 CACNA2D2Q9NY47 1150 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 PKD2L2Q9NZM6 624 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 PSME2Q9UL46 239 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 RAP2CQ9Y3L5 183 aa9.91□□□□□ -0.82
PSEN1-204ENST00000394164 MANSC4A6NHS7 340 aaPredicted RBP9.9□□□□□ -0.82
PSEN1-204ENST00000394164 MTSS1O43312 755 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 TADA2AO75478 443 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 MTHFD1P11586 935 aaKnown RBP9.9□□□□□ -0.82
PSEN1-204ENST00000394164 HCAR3P49019 387 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 YBX1P67809 324 aaKnown RBP9.9□□□□□ -0.82
PSEN1-204ENST00000394164 SLC36A3Q495N2 470 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 PCID2Q5JVF3 399 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 C10orf120Q5SQS8 335 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 CRTC3Q6UUV7 619 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 ERMP1Q7Z2K6 904 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 PIM3Q86V86 326 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 ANKRD13BQ86YJ7 626 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 REM2Q8IYK8 340 aaPredicted RBP9.9□□□□□ -0.82
PSEN1-204ENST00000394164 CMTR2Q8IYT2 770 aaKnown RBP9.9□□□□□ -0.82
PSEN1-204ENST00000394164 LGI2Q8N0V4 545 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 ZCCHC7Q8N3Z6 543 aaKnown RBP9.9□□□□□ -0.82
PSEN1-204ENST00000394164 DHRSXQ8N5I4 330 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 PSMA8Q8TAA3 256 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 CALML6Q8TD86 181 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 HEXDCQ8WVB3 486 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 MYEOVQ96EZ4 313 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 MRGPRX2Q96LB1 330 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 CCDC90BQ9GZT6 254 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 TRIT1Q9H3H1 467 aaKnown RBP9.9□□□□□ -0.82
PSEN1-204ENST00000394164 TRPV5Q9NQA5 729 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 ABCB10Q9NRK6 738 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 OXSMQ9NWU1 459 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 SUCOQ9UBS9 1254 aaKnown RBP9.9□□□□□ -0.82
PSEN1-204ENST00000394164 NEU3Q9UQ49 428 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 AAR2Q9Y312 384 aaKnown RBP9.9□□□□□ -0.82
PSEN1-204ENST00000394164 FAM155AB1AL88 458 aaPredicted RBP9.9□□□□□ -0.82
PSEN1-204ENST00000394164 H0YJX3 145 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 MRASO14807 208 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 RSL1D1O76021 490 aaKnown RBP9.9□□□□□ -0.82
PSEN1-204ENST00000394164 MPOP05164 745 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 CHRNB1P11230 501 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 NCK1P16333 377 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 KCNA5P22460 613 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 HOXC8P31273 242 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 CLK3P49761 638 aaKnown RBP9.9□□□□□ -0.82
PSEN1-204ENST00000394164 MGAT3Q09327 533 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 FASTKQ14296 549 aaKnown RBP9.9□□□□□ -0.82
PSEN1-204ENST00000394164 IHHQ14623 411 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 FAM171A1Q5VUB5 890 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 DDIASQ8IXT1 998 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 OR13F1Q8NGS4 319 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 BLOC1S5Q8TDH9 187 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 SOCS4Q8WXH5 440 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 BHMTQ93088 406 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 PGAP3Q96FM1 320 aaPredicted RBP9.9□□□□□ -0.82
PSEN1-204ENST00000394164 RPRD1AQ96P16 312 aaPredicted RBP9.9□□□□□ -0.82
PSEN1-204ENST00000394164 FAM193BQ96PV7 902 aaPredicted RBP9.9□□□□□ -0.82
PSEN1-204ENST00000394164 ZNF347Q96SE7 839 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 UNC93B1Q9H1C4 597 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 RHOJQ9H4E5 214 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 ATP13A3Q9H7F0 1226 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 CATSPERBQ9H7T0 1116 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 SP110Q9HB58 689 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 SPAG4Q9NPE6 437 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 ANKMY1Q9P2S6 941 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 MTRRQ9UBK8 725 aa9.9□□□□□ -0.82
PSEN1-204ENST00000394164 TSC2P49815 1807 aa9.9□□□□□ -0.83
PSEN1-204ENST00000394164 TCRBV3S1A0A5B6 114 aa9.9□□□□□ -0.83
PSEN1-204ENST00000394164 TAF4O00268 1085 aa9.9□□□□□ -0.83
PSEN1-204ENST00000394164 MATN3O15232 486 aa9.9□□□□□ -0.83
PSEN1-204ENST00000394164 BCAS1O75363 584 aaPredicted RBP9.9□□□□□ -0.83
PSEN1-204ENST00000394164 DLGAP3O95886 979 aa9.9□□□□□ -0.83
PSEN1-204ENST00000394164 HSPA8P11142 646 aaKnown RBP9.9□□□□□ -0.83
PSEN1-204ENST00000394164 CPB1P15086 417 aa9.9□□□□□ -0.83
PSEN1-204ENST00000394164 CCNCP24863 283 aa9.9□□□□□ -0.83
PSEN1-204ENST00000394164 SERPINB1P30740 379 aa9.9□□□□□ -0.83
PSEN1-204ENST00000394164 BMPR1AP36894 532 aa9.9□□□□□ -0.83
PSEN1-204ENST00000394164 PLA2G16P53816 162 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms