RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 OLIG2Q13516 323 aa30.43■■■□□ 2.46
CMTM4-202ENST00000394106 SPRED1Q7Z699 444 aa30.43■■■□□ 2.46
CMTM4-202ENST00000394106 PHYKPLQ8IUZ5 450 aa30.43■■■□□ 2.46
CMTM4-202ENST00000394106 NAGSQ8N159 534 aa30.43■■■□□ 2.46
CMTM4-202ENST00000394106 ARL14Q8N4G2 192 aa30.43■■■□□ 2.46
CMTM4-202ENST00000394106 CARD9Q9H257 536 aa30.43■■■□□ 2.46
CMTM4-202ENST00000394106 TRIM39Q9HCM9 518 aa30.43■■■□□ 2.46
CMTM4-202ENST00000394106 GRID2O43424 1007 aa30.42■■■□□ 2.46
CMTM4-202ENST00000394106 NUAK1O60285 661 aa30.42■■■□□ 2.46
CMTM4-202ENST00000394106 PDX1P52945 283 aa30.42■■■□□ 2.46
CMTM4-202ENST00000394106 C3orf38Q5JPI3 329 aa30.42■■■□□ 2.46
CMTM4-202ENST00000394106 ARHGEF18Q6ZSZ5 1173 aa30.42■■■□□ 2.46
CMTM4-202ENST00000394106 C17orf82Q86X59 251 aaPredicted RBP30.42■■■□□ 2.46
CMTM4-202ENST00000394106 IL17CQ9P0M4 197 aa30.42■■■□□ 2.46
CMTM4-202ENST00000394106 SATB2Q9UPW6 733 aa30.42■■■□□ 2.46
CMTM4-202ENST00000394106 KCNK6Q9Y257 313 aa30.42■■■□□ 2.46
CMTM4-202ENST00000394106 PKP3Q9Y446 797 aa30.42■■■□□ 2.46
CMTM4-202ENST00000394106 C5orf60A6NFR6 353 aa30.41■■■□□ 2.46
CMTM4-202ENST00000394106 D6RAR5 112 aa30.41■■■□□ 2.46
CMTM4-202ENST00000394106 MTX2O75431 263 aa30.41■■■□□ 2.46
CMTM4-202ENST00000394106 ADRA1AP35348 466 aa30.41■■■□□ 2.46
CMTM4-202ENST00000394106 SPAM1P38567 509 aa30.41■■■□□ 2.46
CMTM4-202ENST00000394106 CCZ1BP86790 482 aa30.41■■■□□ 2.46
CMTM4-202ENST00000394106 CCZ1P86791 482 aaPredicted RBP30.41■■■□□ 2.46
CMTM4-202ENST00000394106 ADGRG6Q86SQ4 1221 aa30.41■■■□□ 2.46
CMTM4-202ENST00000394106 GRAMD1AQ96CP6 724 aa30.41■■■□□ 2.46
CMTM4-202ENST00000394106 DCBLD2Q96PD2 775 aa30.41■■■□□ 2.46
CMTM4-202ENST00000394106 PPP1R2P1Q96PQ5 205 aa30.41■■■□□ 2.46
CMTM4-202ENST00000394106 ALS2CR12Q96Q35 445 aa30.41■■■□□ 2.46
CMTM4-202ENST00000394106 POLR1BQ9H9Y6 1135 aa30.41■■■□□ 2.46
CMTM4-202ENST00000394106 IL26Q9NPH9 171 aa30.41■■■□□ 2.46
CMTM4-202ENST00000394106 ATXN7L1Q9ULK2 861 aaPredicted RBP30.41■■■□□ 2.46
CMTM4-202ENST00000394106 APC2O95996 2303 aa30.41■■■□□ 2.46
CMTM4-202ENST00000394106 TRBV23OR9-2A0A075B6M9 112 aa30.4■■■□□ 2.46
CMTM4-202ENST00000394106 SPARCL1Q14515 664 aa30.4■■■□□ 2.46
CMTM4-202ENST00000394106 RPS6KA1Q15418 735 aa30.4■■■□□ 2.46
CMTM4-202ENST00000394106 ATP13A5Q4VNC0 1218 aa30.4■■■□□ 2.46
CMTM4-202ENST00000394106 ZDHHC20Q5W0Z9 365 aa30.4■■■□□ 2.46
CMTM4-202ENST00000394106 CRTC3Q6UUV7 619 aa30.4■■■□□ 2.46
CMTM4-202ENST00000394106 FAM151BQ6UXP7 276 aa30.4■■■□□ 2.46
CMTM4-202ENST00000394106 RANBP10Q6VN20 620 aa30.4■■■□□ 2.46
CMTM4-202ENST00000394106 B3GNT8Q7Z7M8 397 aa30.4■■■□□ 2.46
CMTM4-202ENST00000394106 GDAP1Q8TB36 358 aa30.4■■■□□ 2.46
CMTM4-202ENST00000394106 SLC35B2Q8TB61 432 aa30.4■■■□□ 2.46
CMTM4-202ENST00000394106 ATG4AQ8WYN0 398 aa30.4■■■□□ 2.46
CMTM4-202ENST00000394106 TMEM121Q9BTD3 319 aa30.4■■■□□ 2.46
CMTM4-202ENST00000394106 FOXP3Q9BZS1 431 aa30.4■■■□□ 2.46
CMTM4-202ENST00000394106 TLX3O43711 291 aaPredicted RBP30.39■■■□□ 2.46
CMTM4-202ENST00000394106 NRDCO43847 1150 aa30.39■■■□□ 2.46
CMTM4-202ENST00000394106 ALDH4A1P30038 563 aa30.39■■■□□ 2.46
CMTM4-202ENST00000394106 LSSP48449 732 aa30.39■■■□□ 2.46
CMTM4-202ENST00000394106 OR1D5P58170 312 aa30.39■■■□□ 2.46
CMTM4-202ENST00000394106 MEI1Q5TIA1 1274 aa30.39■■■□□ 2.46
CMTM4-202ENST00000394106 FOXR1Q6PIV2 292 aa30.39■■■□□ 2.46
CMTM4-202ENST00000394106 VPS35Q96QK1 796 aa30.39■■■□□ 2.46
CMTM4-202ENST00000394106 TBL1YQ9BQ87 522 aa30.39■■■□□ 2.46
CMTM4-202ENST00000394106 EPB41L5Q9HCM4 733 aa30.39■■■□□ 2.46
CMTM4-202ENST00000394106 TMPRSS11EQ9UL52 423 aa30.39■■■□□ 2.46
CMTM4-202ENST00000394106 ARL5AQ9Y689 179 aa30.39■■■□□ 2.46
CMTM4-202ENST00000394106 ACACAQ13085 2346 aa30.39■■■□□ 2.45
CMTM4-202ENST00000394106 ZFHX4Q86UP3 3567 aa30.38■■■□□ 2.45
CMTM4-202ENST00000394106 STX7O15400 261 aaKnown RBP30.38■■■□□ 2.45
CMTM4-202ENST00000394106 SNX2O60749 519 aa30.38■■■□□ 2.45
CMTM4-202ENST00000394106 EML2O95834 649 aa30.38■■■□□ 2.45
CMTM4-202ENST00000394106 ACTN2P35609 894 aa30.38■■■□□ 2.45
CMTM4-202ENST00000394106 GDF10P55107 478 aa30.38■■■□□ 2.45
CMTM4-202ENST00000394106 B4GALNT1Q00973 533 aa30.38■■■□□ 2.45
CMTM4-202ENST00000394106 PTPRCAPQ14761 206 aa30.38■■■□□ 2.45
CMTM4-202ENST00000394106 CHRNA6Q15825 494 aa30.38■■■□□ 2.45
CMTM4-202ENST00000394106 PLA2G4EQ3MJ16 856 aa30.38■■■□□ 2.45
CMTM4-202ENST00000394106 AMZ1Q400G9 498 aa30.38■■■□□ 2.45
CMTM4-202ENST00000394106 KHDC1Q4VXA5 237 aaKnown RBP30.38■■■□□ 2.45
CMTM4-202ENST00000394106 ZNF438Q7Z4V0 828 aa30.38■■■□□ 2.45
CMTM4-202ENST00000394106 UBE2Q2Q8WVN8 375 aa30.38■■■□□ 2.45
CMTM4-202ENST00000394106 TBC1D29Q9UFV1 150 aa30.38■■■□□ 2.45
CMTM4-202ENST00000394106 ZZEF1O43149 2961 aa30.37■■■□□ 2.45
CMTM4-202ENST00000394106 GLYATL1P3A0A0U1RQE8 302 aa30.37■■■□□ 2.45
CMTM4-202ENST00000394106 A0A1W2PNU3 283 aaPredicted RBP30.37■■■□□ 2.45
CMTM4-202ENST00000394106 GPR89AB7ZAQ6 455 aa30.37■■■□□ 2.45
CMTM4-202ENST00000394106 GPR89BP0CG08 455 aa30.37■■■□□ 2.45
CMTM4-202ENST00000394106 INHBCP55103 352 aa30.37■■■□□ 2.45
CMTM4-202ENST00000394106 PARP6Q2NL67 630 aa30.37■■■□□ 2.45
CMTM4-202ENST00000394106 TBC1D25Q3MII6 688 aa30.37■■■□□ 2.45
CMTM4-202ENST00000394106 C19orf48Q6RUI8 117 aa30.37■■■□□ 2.45
CMTM4-202ENST00000394106 ZNF662Q6ZS27 426 aa30.37■■■□□ 2.45
CMTM4-202ENST00000394106 SLC13A5Q86YT5 568 aaPredicted RBP30.37■■■□□ 2.45
CMTM4-202ENST00000394106 LSMEM2Q8N112 164 aa30.37■■■□□ 2.45
CMTM4-202ENST00000394106 TAB3Q8N5C8 712 aaPredicted RBP30.37■■■□□ 2.45
CMTM4-202ENST00000394106 LRRC45Q96CN5 670 aa30.37■■■□□ 2.45
CMTM4-202ENST00000394106 GRPEL1Q9HAV7 217 aa30.37■■■□□ 2.45
CMTM4-202ENST00000394106 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP30.37■■■□□ 2.45
CMTM4-202ENST00000394106 PMS2P1A4D2B8 440 aa30.36■■■□□ 2.45
CMTM4-202ENST00000394106 C2orf81A6NN90 581 aa30.36■■■□□ 2.45
CMTM4-202ENST00000394106 PPM1DO15297 605 aa30.36■■■□□ 2.45
CMTM4-202ENST00000394106 GPR39O43194 453 aa30.36■■■□□ 2.45
CMTM4-202ENST00000394106 B4GAT1O43505 415 aa30.36■■■□□ 2.45
CMTM4-202ENST00000394106 VEGFDO43915 354 aa30.36■■■□□ 2.45
CMTM4-202ENST00000394106 UGT1A9O60656 530 aa30.36■■■□□ 2.45
CMTM4-202ENST00000394106 CDK14O94921 469 aa30.36■■■□□ 2.45
CMTM4-202ENST00000394106 METTL18O95568 372 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms