RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 ZMYM5Q9UJ78 669 aa16.27■□□□□ 0.19
PHTF1-205ENST00000393357 PTBP2Q9UKA9 531 aaKnown RBP16.27■□□□□ 0.19
PHTF1-205ENST00000393357 FAM155AB1AL88 458 aaPredicted RBP16.26■□□□□ 0.19
PHTF1-205ENST00000393357 ARVCFO00192 962 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 SNPHO15079 494 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 JRKO75564 520 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 DNTTP04053 509 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 ALDH2P05091 517 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 HLA-DQB2P05538 268 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 LBPP18428 481 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 SOWAHCQ53LP3 525 aaPredicted RBP16.26■□□□□ 0.19
PHTF1-205ENST00000393357 UGT3A1Q6NUS8 523 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 VASH1Q7L8A9 365 aaPredicted RBP16.26■□□□□ 0.19
PHTF1-205ENST00000393357 PHACTR4Q8IZ21 702 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 OR10A6Q8NH74 314 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 NODALQ96S42 347 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 ZNF347Q96SE7 839 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 REXO4Q9GZR2 422 aaKnown RBP16.26■□□□□ 0.19
PHTF1-205ENST00000393357 MYBPHLA2RUH7 354 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 CLASP2O75122 1294 aaKnown RBP16.26■□□□□ 0.19
PHTF1-205ENST00000393357 NDUFS2O75306 463 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 GOT2P00505 430 aaKnown RBP16.26■□□□□ 0.19
PHTF1-205ENST00000393357 PAMP19021 973 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 TTKP33981 857 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 WNT3AP56704 352 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 TNFAIP1Q13829 316 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 ATP6AP1LQ52LC2 224 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 ZNF678Q5SXM1 525 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 C9orf57Q5W0N0 161 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 UBE2J2Q8N2K1 259 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 ISL2Q96A47 359 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 C12orf42Q96LP6 360 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 GAD1Q99259 594 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 TP63Q9H3D4 680 aaPredicted RBP16.26■□□□□ 0.19
PHTF1-205ENST00000393357 RERGLQ9H628 205 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 TMEM30AQ9NV96 361 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 GALPQ9UBC7 116 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 TTC3P53804 2025 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 AQP12BA6NM10 295 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 TAF4O00268 1085 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 SLC22A2O15244 555 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 ABCB7O75027 752 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 CRHBPP24387 322 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 MZF1P28698 734 aaPredicted RBP16.26■□□□□ 0.19
PHTF1-205ENST00000393357 KPNA2P52292 529 aaKnown RBP16.26■□□□□ 0.19
PHTF1-205ENST00000393357 MRPS15P82914 257 aaKnown RBP16.26■□□□□ 0.19
PHTF1-205ENST00000393357 OXA1LQ15070 435 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 DPY19L1Q2PZI1 675 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 ADPRMQ3LIE5 342 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 ARL13BQ3SXY8 428 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 NEK10Q6ZWH5 1172 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 AQP12AQ8IXF9 295 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 SCML4Q8N228 414 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 TMEM125Q96AQ2 219 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 ZFYVE19Q96K21 471 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 SNX27Q96L92 541 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 C11orf84Q9BUA3 381 aaPredicted RBP16.26■□□□□ 0.19
PHTF1-205ENST00000393357 RNF38Q9H0F5 515 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 QTRT2Q9H974 415 aaKnown RBP16.26■□□□□ 0.19
PHTF1-205ENST00000393357 ZFP14Q9HCL3 533 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 PCDHGA11Q9Y5H2 935 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 SLC30A1Q9Y6M5 507 aa16.26■□□□□ 0.19
PHTF1-205ENST00000393357 MGAMO43451 1857 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 SOBPA7XYQ1 873 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 H0YJX3 145 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 HBP1O60381 514 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 RECQL5O94762 991 aaPredicted RBP16.25■□□□□ 0.19
PHTF1-205ENST00000393357 C22orf31O95567 290 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 FYNP06241 537 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 ACADSBP45954 432 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 CLK1P49759 484 aaKnown RBP16.25■□□□□ 0.19
PHTF1-205ENST00000393357 TP53BP2Q13625 1128 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 PAFAH1B3Q15102 231 aaKnown RBP16.25■□□□□ 0.19
PHTF1-205ENST00000393357 OR4D1Q15615 310 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 ISCA2Q86U28 154 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 FAM126BQ8IXS8 530 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 DTWD1Q8N5C7 304 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 MCOLN3Q8TDD5 553 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 RORBQ92753 470 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 OTUD5Q96G74 571 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 NPY6RQ99463 290 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 KIFC1Q9BW19 673 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 PRRG3Q9BZD7 231 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 TRIM39Q9HCM9 518 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 SNX8Q9Y5X2 465 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 ADM5C9JUS6 153 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 FFAR3O14843 346 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 GPR42O15529 346 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 CHEK2O96017 543 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 HMBSP08397 361 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 NPR3P17342 541 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 FMO4P31512 558 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 HADHAP40939 763 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 ARCN1P48444 511 aaKnown RBP16.25■□□□□ 0.19
PHTF1-205ENST00000393357 VAC14Q08AM6 782 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 ATAD3BQ5T9A4 648 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 RAB44Q7Z6P3 723 aaPredicted RBP16.25■□□□□ 0.19
PHTF1-205ENST00000393357 DEPDC4Q8N2C3 294 aa16.25■□□□□ 0.19
PHTF1-205ENST00000393357 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.25■□□□□ 0.19
PHTF1-205ENST00000393357 FAM83FQ8NEG4 500 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms