RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 ATP1A1P05023 1023 aaKnown RBP12.54□□□□□ -0.4
GGPS1-203ENST00000391855 LPOP22079 712 aaPredicted RBP12.54□□□□□ -0.4
GGPS1-203ENST00000391855 MSNP26038 577 aaKnown RBP12.54□□□□□ -0.4
GGPS1-203ENST00000391855 CLCNKAP51800 687 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 BIRC2Q13490 618 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 GTF2H3Q13889 308 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 SPIDRQ14159 915 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 RTP5Q14D33 572 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 CCNG2Q16589 344 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 CLPPQ16740 277 aaPredicted RBP12.54□□□□□ -0.4
GGPS1-203ENST00000391855 DRICH1Q6PGQ1 229 aaPredicted RBP12.54□□□□□ -0.4
GGPS1-203ENST00000391855 SLC30A9Q6PML9 568 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 AVL9Q8NBF6 648 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 BRSK1Q8TDC3 778 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 PTCD2Q8WV60 388 aaKnown RBP12.54□□□□□ -0.4
GGPS1-203ENST00000391855 SMOXQ9NWM0 555 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 ACACBO00763 2458 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 TPRP12270 2363 aaKnown RBP12.54□□□□□ -0.4
GGPS1-203ENST00000391855 TMX2-CTNND1H3BSU7 103 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 NTN3O00634 580 aaPredicted RBP12.54□□□□□ -0.4
GGPS1-203ENST00000391855 CSO75390 466 aaKnown RBP12.54□□□□□ -0.4
GGPS1-203ENST00000391855 AP2A1O95782 977 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 AK4P27144 223 aaPredicted RBP12.54□□□□□ -0.4
GGPS1-203ENST00000391855 FDFT1P37268 417 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 GDF10P55107 478 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 CLDN6P56747 220 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 NR1D2Q14995 579 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 LDLRAP1Q5SW96 308 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 KCTD11Q693B1 232 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 LINC00523Q86TU6 105 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 LRRTM4Q86VH4 590 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 PROSER1Q86XN7 944 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 CCNJLQ8IV13 435 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 ATG4AQ8WYN0 398 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 TLR10Q9BXR5 811 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 STN1Q9H668 368 aaKnown RBP12.54□□□□□ -0.4
GGPS1-203ENST00000391855 BPIFA1Q9NP55 256 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 IL26Q9NPH9 171 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 HOMER3Q9NSC5 361 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 SPATS2LQ9NUQ6 558 aaKnown RBP12.54□□□□□ -0.4
GGPS1-203ENST00000391855 ATXN10Q9UBB4 475 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 ZNHIT2Q9UHR6 403 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 ZNF148Q9UQR1 794 aa12.54□□□□□ -0.4
GGPS1-203ENST00000391855 OR5K4A6NMS3 321 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 CHUKO15111 745 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 KMOO15229 486 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 KCNJ13O60928 360 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 CAPNS1P04632 268 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 HADHAP40939 763 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 ISXQ2M1V0 245 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 ATP13A5Q4VNC0 1218 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 C4orf22Q6V702 233 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 CHST15Q7LFX5 561 aaPredicted RBP12.53□□□□□ -0.4
GGPS1-203ENST00000391855 ZNF438Q7Z4V0 828 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 ADGRG6Q86SQ4 1221 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 LSMEM2Q8N112 164 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 NAGSQ8N159 534 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 ARL14Q8N4G2 192 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 CCDC89Q8N998 374 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 DDHD1Q8NEL9 900 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 TTC25Q96NG3 672 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 GFM1Q96RP9 751 aaKnown RBP12.53□□□□□ -0.4
GGPS1-203ENST00000391855 APOL2Q9BQE5 337 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 TIMM29Q9BSF4 260 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 OR2AG1Q9H205 316 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 LRRN3Q9H3W5 708 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 SYNDIG1Q9H7V2 258 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 PAK5Q9P286 719 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 LRIT1Q9P2V4 623 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 ZMIZ1Q9ULJ6 1067 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 JRKLQ9Y4A0 524 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 RNF215Q9Y6U7 377 aa12.53□□□□□ -0.4
GGPS1-203ENST00000391855 ZNF106Q9H2Y7 1883 aaKnown RBP12.52□□□□□ -0.4
GGPS1-203ENST00000391855 RHPN2P1A8MT19 583 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 D6RAR5 112 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 CDK14O94921 469 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 PRAMEF1O95521 474 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 METTL18O95568 372 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 ECEL1O95672 775 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 GAS8O95995 478 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 IFNB1P01574 187 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 FGGP02679 453 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 RPLP0P05388 317 aaKnown RBP12.52□□□□□ -0.41
GGPS1-203ENST00000391855 ACP5P13686 325 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 ZNF8P17098 575 aaPredicted RBP12.52□□□□□ -0.41
GGPS1-203ENST00000391855 VCLP18206 1134 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 MLLT3P42568 568 aaPredicted RBP12.52□□□□□ -0.41
GGPS1-203ENST00000391855 GPR3P46089 330 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 FASLGP48023 281 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 EIF3IQ13347 325 aaKnown RBP12.52□□□□□ -0.41
GGPS1-203ENST00000391855 SIX1Q15475 284 aaPredicted RBP12.52□□□□□ -0.41
GGPS1-203ENST00000391855 CHRNA6Q15825 494 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 DENND5AQ6IQ26 1287 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 FAM151BQ6UXP7 276 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 SPRED1Q7Z699 444 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 MARCH9Q86YJ5 346 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 OR4K2Q8NGD2 314 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 GDAP1Q8TB36 358 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 C1orf54Q8WWF1 131 aa12.52□□□□□ -0.41
GGPS1-203ENST00000391855 ULK4Q96C45 1275 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms