RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 DDX4Q9NQI0 724 aaKnown RBP16.07■□□□□ 0.16
SHANK1-204ENST00000391814 ADGRB3O60242 1522 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 CEP170BQ9Y4F5 1589 aaPredicted RBP16.07■□□□□ 0.16
SHANK1-204ENST00000391814 FGF10O15520 208 aaPredicted RBP16.07■□□□□ 0.16
SHANK1-204ENST00000391814 CHP2O43745 196 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 CLPXO76031 633 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 CKBP12277 381 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 BDNFP23560 247 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 RPA4Q13156 261 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 TPRG1LQ5T0D9 272 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 GHDCQ8N2G8 530 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 SEC14L1Q92503 715 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 ROPN1LQ96C74 230 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 MAU2Q9Y6X3 613 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 OVOS2A0A0J9YW53 1432 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 IGSF6O95976 241 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 TTPAP49638 278 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 KLF1Q13351 362 aaPredicted RBP16.06■□□□□ 0.16
SHANK1-204ENST00000391814 OVOS2Q6IE36 1432 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 CIPCQ9C0C6 399 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 TBCCD1Q9NVR7 557 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 SUCOQ9UBS9 1254 aaKnown RBP16.06■□□□□ 0.16
SHANK1-204ENST00000391814 TLL2Q9Y6L7 1015 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 OR2AT4A6NND4 320 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 C12orf71A8MTZ7 269 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 PRAMEF1O95521 474 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 ZNF24P17028 368 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 CRTC2Q53ET0 693 aaPredicted RBP16.06■□□□□ 0.16
SHANK1-204ENST00000391814 ARSHQ5FYA8 562 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 RBM20Q5T481 1227 aaKnown RBP16.06■□□□□ 0.16
SHANK1-204ENST00000391814 OR4L1Q8NH43 312 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 ZSCAN5AQ9BUG6 496 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 SEMA3GQ9NS98 782 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 TESMINQ9Y4I5 508 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 HLA-DQA1Q5Y7H0 255 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 ZNF730Q6ZMV8 503 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 PRDM12Q9H4Q4 367 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 SLC7A8Q9UHI5 535 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 SERPINB7O75635 380 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 APOC1P02654 83 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 C2P06681 752 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 CLUP10909 449 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 CYP2A6P11509 494 aaPredicted RBP16.06■□□□□ 0.16
SHANK1-204ENST00000391814 TCEAL5Q5H9L2 206 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 ZZZ3Q8IYH5 903 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 POP5Q969H6 163 aaKnown RBP16.06■□□□□ 0.16
SHANK1-204ENST00000391814 QRFPRQ96P65 431 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 PCDH10Q9P2E7 1040 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 MAP2P11137 1827 aaKnown RBP16.06■□□□□ 0.16
SHANK1-204ENST00000391814 NOL4O94818 638 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 UROSP10746 265 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 TNFSF9P41273 254 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 RPL26P61254 145 aaKnown RBP16.06■□□□□ 0.16
SHANK1-204ENST00000391814 ABRQ12979 859 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 JOSD2Q8TAC2 188 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 TRAPPC12Q8WVT3 735 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 TSEN15Q8WW01 171 aaKnown RBP16.06■□□□□ 0.16
SHANK1-204ENST00000391814 UFD1Q92890 307 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 CLIP3Q96DZ5 547 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 PKP2Q99959 881 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 ZNF350Q9GZX5 532 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 MAN2B2Q9Y2E5 1009 aa16.06■□□□□ 0.16
SHANK1-204ENST00000391814 FADS2P1A8MWK0 482 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 IFNA16P05015 189 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 ZNF460Q14592 562 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 NPTX1Q15818 432 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 FBXO48Q5FWF7 155 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 GARNL3Q5VVW2 1013 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 LAPTM4BQ86VI4 370 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 PPCDCQ96CD2 204 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 VWA7Q9Y334 891 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 KANTRA0A1W2PQU2 76 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 ITM2AO43736 263 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 COL6A1P12109 1028 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 ACADVLP49748 655 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 PITPNAQ00169 270 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 SPAG16Q8N0X2 631 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 TREM1Q9NP99 234 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 TAS2R7Q9NYW3 318 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 RBM7Q9Y580 266 aaKnown RBP16.05■□□□□ 0.16
SHANK1-204ENST00000391814 SERPINA3P01011 423 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 TMEM236Q5W0B7 351 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 OR10A6Q8NH74 314 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 CDK5RAP1Q96SZ6 601 aaKnown RBP16.05■□□□□ 0.16
SHANK1-204ENST00000391814 DNAJB4Q9UDY4 337 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 DNTTP04053 509 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 ALDH7A1P49419 539 aaKnown RBP16.05■□□□□ 0.16
SHANK1-204ENST00000391814 MPP1Q00013 466 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 PLA2G4EQ3MJ16 856 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 XKR5Q6UX68 686 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 LRRC57Q8N9N7 239 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 SLC37A3Q8NCC5 494 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 MAP4K5Q9Y4K4 846 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 ZNF536O15090 1300 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 IQGAP1P46940 1657 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 SH3D21A4FU49 640 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 CXCR6O00574 342 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 ACOX3O15254 700 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 MPZL2O60487 215 aa16.05■□□□□ 0.16
SHANK1-204ENST00000391814 MOGQ16653 247 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms