RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 NR6A1Q15406 480 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 CAMK4Q16566 473 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 ZNF648Q5T619 568 aaPredicted RBP11.66□□□□□ -0.54
SOD1-202ENST00000389995 TMCO4Q5TGY1 634 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 FAM69BQ5VUD6 431 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 JMJD6Q6NYC1 403 aaPredicted RBP11.66□□□□□ -0.54
SOD1-202ENST00000389995 FAM92BQ6ZTR7 304 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 PLXDC1Q8IUK5 500 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 LZTR1Q8N653 840 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 C3orf20Q8ND61 904 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 SH3KBP1Q96B97 665 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 SCRN2Q96FV2 425 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 COX14Q96I36 57 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 PEBP4Q96S96 227 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 ING2Q9H160 280 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 STN1Q9H668 368 aaKnown RBP11.66□□□□□ -0.54
SOD1-202ENST00000389995 ARFGAP3Q9NP61 516 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 MLXIPLQ9NP71 852 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 NLRC4Q9NPP4 1024 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 LHX9Q9NQ69 397 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 ACSS2Q9NR19 701 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 DONSONQ9NYP3 566 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 PCSK1NQ9UHG2 260 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 PCDHGA6Q9Y5G7 932 aa11.66□□□□□ -0.54
SOD1-202ENST00000389995 DOCK10Q96BY6 2186 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 MYO7BQ6PIF6 2116 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 PSMD11O00231 422 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 EPHB6O15197 1021 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 SOCS5O75159 536 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 PGLSO95336 258 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 PEX11BO96011 259 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 C9P02748 559 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 F3P13726 295 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 RENBPP51606 427 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 PPP1CAP62136 330 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 RFTN1Q14699 578 aaPredicted RBP11.65□□□□□ -0.54
SOD1-202ENST00000389995 KCNAB1Q14722 419 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 CLEC16AQ2KHT3 1053 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 PPP6R3Q5H9R7 873 aaPredicted RBP11.65□□□□□ -0.54
SOD1-202ENST00000389995 DNAJC24Q6P3W2 148 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 RFX8Q6ZV50 586 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 ZNF677Q86XU0 584 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.65□□□□□ -0.54
SOD1-202ENST00000389995 PIH1D2Q8WWB5 315 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 RSC1A1Q92681 617 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 PLEKHG4BQ96PX9 1271 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 MCCC1Q96RQ3 725 aaPredicted RBP11.65□□□□□ -0.54
SOD1-202ENST00000389995 NUDCD1Q96RS6 583 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 CNPY3Q9BT09 278 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 GANQ9H2C0 597 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 SLAMF7Q9NQ25 335 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 SEPT11Q9NVA2 429 aaKnown RBP11.65□□□□□ -0.54
SOD1-202ENST00000389995 KCTD5Q9NXV2 234 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 CNOT6Q9ULM6 557 aaKnown RBP11.65□□□□□ -0.54
SOD1-202ENST00000389995 CCDC168Q8NDH2 2452 aa11.65□□□□□ -0.54
SOD1-202ENST00000389995 A6NL46 340 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 FADS2P1A8MWK0 482 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 UBXN7O94888 489 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 FGF5P12034 268 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 AMD1P17707 334 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 PTGIRP43119 386 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 AIF1P55008 147 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 GSCP56915 257 aaPredicted RBP11.64□□□□□ -0.55
SOD1-202ENST00000389995 POLR2FP61218 127 aaKnown RBP11.64□□□□□ -0.55
SOD1-202ENST00000389995 UBE2IP63279 158 aaKnown RBP11.64□□□□□ -0.55
SOD1-202ENST00000389995 RAPSNQ13702 412 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 IHHQ14623 411 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 IL11RAQ14626 422 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 SEPT7Q16181 437 aaKnown RBP11.64□□□□□ -0.55
SOD1-202ENST00000389995 UGT8Q16880 541 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 PLA2G4EQ3MJ16 856 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 PPP1R15BQ5SWA1 713 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 ARMC12Q5T9G4 340 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 CACHD1Q5VU97 1274 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 SLC6A19Q695T7 634 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 PWWP2BQ6NUJ5 590 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 CERS6Q6ZMG9 384 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 USP45Q70EL2 814 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 MON1BQ7L1V2 547 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 PPP1R3BQ86XI6 285 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 PHF13Q86YI8 300 aaPredicted RBP11.64□□□□□ -0.55
SOD1-202ENST00000389995 ARFGAP1Q8N6T3 406 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 RBMXL3Q8N7X1 1067 aaKnown RBP11.64□□□□□ -0.55
SOD1-202ENST00000389995 EXD1Q8NHP7 514 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 RANBP9Q96S59 729 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 HERPUD2Q9BSE4 406 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 SNRNP25Q9BV90 132 aaKnown RBP11.64□□□□□ -0.55
SOD1-202ENST00000389995 NUDT9Q9BW91 350 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.64□□□□□ -0.55
SOD1-202ENST00000389995 BRD8Q9H0E9 1235 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 OSGEPL1Q9H4B0 414 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 SIK3Q9Y2K2 1263 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 PCDHGA9Q9Y5G4 932 aaKnown RBP11.64□□□□□ -0.55
SOD1-202ENST00000389995 ANKRD12Q6UB98 2062 aa11.64□□□□□ -0.55
SOD1-202ENST00000389995 PKDREJQ9NTG1 2253 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 KIR2DS5A0A0G2JLQ3 304 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 A0A0G2JNG1 304 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 ARHGAP10A1A4S6 786 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 LILRA5A6NI73 299 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 KIR2DS3K7RE56 304 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms