RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 VMP1Q96GC9 406 aa13.39□□□□□ -0.27
CCDC57-202ENST00000389641 ERVK-18Q9QC07 812 aa13.39□□□□□ -0.27
CCDC57-202ENST00000389641 GTF2IRD1Q9UHL9 959 aa13.39□□□□□ -0.27
CCDC57-202ENST00000389641 MOSPD1Q9UJG1 213 aa13.39□□□□□ -0.27
CCDC57-202ENST00000389641 UGT2A1Q9Y4X1 527 aa13.39□□□□□ -0.27
CCDC57-202ENST00000389641 ASPDHA6ND91 283 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 BBIP1A8MTZ0 92 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 RAD51BO15315 384 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 FMO3P31513 532 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 MTPNP58546 118 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 UFM1P61960 85 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 VAC14Q08AM6 782 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 SNX17Q15036 470 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 FAM214AQ32MH5 1076 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 SLC25A52Q3SY17 297 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 CCDC58Q4VC31 144 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 UNC50Q53HI1 259 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 OTUD1Q5VV17 481 aaPredicted RBP13.38□□□□□ -0.27
CCDC57-202ENST00000389641 SPESP1Q6UW49 350 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 ZDHHC13Q8IUH4 622 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 REM2Q8IYK8 340 aaPredicted RBP13.38□□□□□ -0.27
CCDC57-202ENST00000389641 DCP1BQ8IZD4 617 aaKnown RBP13.38□□□□□ -0.27
CCDC57-202ENST00000389641 ELMOD1Q8N336 334 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 STON2Q8WXE9 905 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 ATL1Q8WXF7 558 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 HDAC2Q92769 488 aaKnown RBP13.38□□□□□ -0.27
CCDC57-202ENST00000389641 NSMCE2Q96MF7 247 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 PPM1MQ96MI6 270 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 FICDQ9BVA6 458 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 TUBB1Q9H4B7 451 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 ZNF214Q9UL59 606 aaPredicted RBP13.38□□□□□ -0.27
CCDC57-202ENST00000389641 G3V2T6 193 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 CLDN5O00501 218 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 GNGT2O14610 69 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 IDH3BO43837 385 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 HS6ST1O60243 411 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 CXCR2P25025 360 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 HMGCS2P54868 508 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 PAFAH1B3Q15102 231 aaKnown RBP13.38□□□□□ -0.27
CCDC57-202ENST00000389641 STEAP3Q658P3 488 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 LYSMD2Q8IV50 215 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 CLYBLQ8N0X4 340 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 ZNF555Q8NEP9 628 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 FIG4Q92562 907 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 RORBQ92753 470 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCDC57-202ENST00000389641 DMRTB1Q96MA1 342 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 CLSTN3Q9BQT9 956 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 FEM1AQ9BSK4 669 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 ZBED2Q9BTP6 218 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 THG1LQ9NWX6 298 aaKnown RBP13.38□□□□□ -0.27
CCDC57-202ENST00000389641 NSMCE4AQ9NXX6 385 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 TNFSF13BQ9Y275 285 aa13.38□□□□□ -0.27
CCDC57-202ENST00000389641 TTC34A8MYJ7 566 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 ZBTB42B2RXF5 422 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 SLC1A7O00341 560 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 CCRL2O00421 344 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 CCNKO75909 580 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 CDK14O94921 469 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 LTA4HP09960 611 aaKnown RBP13.37□□□□□ -0.27
CCDC57-202ENST00000389641 PCMT1P22061 227 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 CBX2Q14781 532 aaPredicted RBP13.37□□□□□ -0.27
CCDC57-202ENST00000389641 PCSK7Q16549 785 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 ZNF678Q5SXM1 525 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 NAPEPLDQ6IQ20 393 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 TMEM207Q6UWW9 146 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 RFPL4BQ6ZWI9 263 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 SYTL1Q8IYJ3 562 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 DCBLD1Q8N8Z6 715 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 OR10Q1Q8NGQ4 319 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 FAR1Q8WVX9 515 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 CEP295NLQ96MC4 621 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 CDK5RAP1Q96SZ6 601 aaKnown RBP13.37□□□□□ -0.27
CCDC57-202ENST00000389641 FDXACB1Q9BRP7 624 aaPredicted RBP13.37□□□□□ -0.27
CCDC57-202ENST00000389641 EMILIN2Q9BXX0 1053 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 C6orf62Q9GZU0 229 aaPredicted RBP13.37□□□□□ -0.27
CCDC57-202ENST00000389641 ZNF639Q9UID6 485 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 SCN1AP35498 2009 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 CITO14578 2027 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 A0A087X1B8 175 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 USP2O75604 605 aaPredicted RBP13.37□□□□□ -0.27
CCDC57-202ENST00000389641 CHRNA1P02708 482 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 GSNP06396 782 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 CYP4B1P13584 511 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 KCNK10P57789 538 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 IL5RAQ01344 420 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 SELPLGQ14242 412 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 LAPTM4AQ15012 233 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 PFKFB4Q16877 469 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 PCID2Q5JVF3 399 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 FAM160B1Q5W0V3 765 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 BLOC1S3Q6QNY0 202 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 GALNT5Q7Z7M9 940 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 CELF2-AS1Q8N7Q2 184 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 MCOLN3Q8TDD5 553 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 TRIB2Q92519 343 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 MBOAT4Q96T53 435 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 DSN1Q9H410 356 aa13.37□□□□□ -0.27
CCDC57-202ENST00000389641 CARS2Q9HA77 564 aaKnown RBP13.37□□□□□ -0.27
CCDC57-202ENST00000389641 DKK3Q9UBP4 350 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms