RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 UBXN8O00124 270 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 MSI1O43347 362 aaKnown RBP14.18□□□□□ -0.14
RTF1-201ENST00000389629 UMPSP11172 480 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 TIMM50Q3ZCQ8 353 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 KRT73Q86Y46 540 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 OR10A6Q8NH74 314 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 LRRC58Q96CX6 371 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 SORT1Q99523 831 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 GPR22Q99680 433 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 SEMA3CQ99985 751 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 PRRG3Q9BZD7 231 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 SH3BP4Q9P0V3 963 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 DDX60Q8IY21 1712 aaKnown RBP14.18□□□□□ -0.14
RTF1-201ENST00000389629 F8W810 466 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 GSTT2P0CG29 244 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 GSTT2BP0CG30 244 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 GSK3BP49841 420 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 IST1P53990 364 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 RFX4Q33E94 735 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 ZNF549Q6P9A3 640 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 TMBIM1Q969X1 311 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 LRATO95237 230 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 VBP1P61758 197 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.17□□□□□ -0.14
RTF1-201ENST00000389629 INTS11Q5TA45 600 aaKnown RBP14.17□□□□□ -0.14
RTF1-201ENST00000389629 LBX2Q6XYB7 198 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 OR52E6Q96RD3 313 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 WDR83Q9BRX9 315 aaKnown RBP14.17□□□□□ -0.14
RTF1-201ENST00000389629 SCUBE2Q9NQ36 999 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 PDLIM7Q9NR12 457 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 TMCC3Q9ULS5 477 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 A8MT66 165 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.17□□□□□ -0.14
RTF1-201ENST00000389629 RGS14O43566 566 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 OXSR1O95747 527 aaPredicted RBP14.17□□□□□ -0.14
RTF1-201ENST00000389629 KRT6AP02538 564 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 KRT6BP04259 564 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 CPOXP36551 454 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 KRT6CP48668 564 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 NIPAL4Q0D2K0 466 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 LAPTM5Q13571 262 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 GALNT3Q14435 633 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 ACAP2Q15057 778 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 ZCCHC8Q6NZY4 707 aaKnown RBP14.17□□□□□ -0.14
RTF1-201ENST00000389629 ARMC8Q8IUR7 673 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 CRNNQ9UBG3 495 aaPredicted RBP14.17□□□□□ -0.14
RTF1-201ENST00000389629 SLC2A6Q9UGQ3 507 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 CNTNAP1P78357 1384 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 MYO18AQ92614 2054 aaKnown RBP14.17□□□□□ -0.14
RTF1-201ENST00000389629 F5H5T6 163 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 PAGE1O75459 146 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 HOXB8P17481 243 aaPredicted RBP14.17□□□□□ -0.14
RTF1-201ENST00000389629 CYP2B6P20813 491 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 RRM2P31350 389 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 TUFMP49411 452 aaKnown RBP14.17□□□□□ -0.14
RTF1-201ENST00000389629 BMXP51813 675 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 AIF1P55008 147 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 METTL25Q8N6Q8 603 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 MYDGFQ969H8 173 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 SERPINB11Q96P15 392 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 KAT8Q9H7Z6 458 aaKnown RBP14.17□□□□□ -0.14
RTF1-201ENST00000389629 MOV10Q9HCE1 1003 aaKnown RBP14.17□□□□□ -0.14
RTF1-201ENST00000389629 INTS10Q9NVR2 710 aaKnown RBP14.17□□□□□ -0.14
RTF1-201ENST00000389629 TMEM9Q9P0T7 183 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 ITGB4P16144 1822 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 GNG14A0A1W2PPG7 69 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 CBX4O00257 560 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 MLYCDO95822 493 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 EDN1P05305 212 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 TMEM236Q5W0B7 351 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 DCLRE1AQ6PJP8 1040 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 ZNF773Q6PK81 442 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 SMG8Q8ND04 991 aaKnown RBP14.17□□□□□ -0.14
RTF1-201ENST00000389629 MYLPFQ96A32 169 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 TBATAQ96M53 351 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 CCNB1IP1Q9NPC3 277 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 EMCNQ9ULC0 261 aa14.17□□□□□ -0.14
RTF1-201ENST00000389629 PRORSD1PA6NEY8 169 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 SAGE2PA6NJ88 616 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 EFCAB9A8MZ26 197 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 CYP2C18P33260 490 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 CXCR3P49682 368 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 OXCT1P55809 520 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 SULT2A1Q06520 285 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 FAM187BQ17R55 369 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 PYDC2Q56P42 97 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 RAB43Q86YS6 212 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 AADATQ8N5Z0 425 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 PIK3C3Q8NEB9 887 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 POLR1EQ9GZS1 481 aaKnown RBP14.16□□□□□ -0.14
RTF1-201ENST00000389629 ABCC13Q9NSE7 274 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 PDP1Q9P0J1 537 aaPredicted RBP14.16□□□□□ -0.14
RTF1-201ENST00000389629 PDE9AO76083 593 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 ARIH2O95376 493 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 GNAO1P09471 354 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 CD36P16671 472 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 PRKACGP22612 351 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 POLD2P49005 469 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 NFATC3Q12968 1075 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 MAD2L1Q13257 205 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms