RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 ZBED2Q9BTP6 218 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 SLC52A3Q9NQ40 469 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 ARMC1Q9NVT9 282 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 GID8Q9NWU2 228 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 PTGDR2Q9Y5Y4 395 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 SLC4A7Q9Y6M7 1214 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 NR5A2O00482 541 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 TNFAIP8O95379 198 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 HSD17B1P14061 328 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 HGFP14210 728 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 MC4RP32245 332 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 CDKL1Q00532 357 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 MAP7D1Q3KQU3 841 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 TBC1D25Q3MII6 688 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 THEMIS2Q5TEJ8 643 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 RNF219Q5W0B1 726 aaPredicted RBP14.85□□□□□ -0.03
SCFD2-201ENST00000388940 BLOC1S3Q6QNY0 202 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 PIANPQ8IYJ0 282 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 TTC30BQ8N4P2 665 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 LRTOMTQ8WZ04 291 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 EME1Q96AY2 570 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 ZNF597Q96LX8 424 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 KLF16Q9BXK1 252 aaPredicted RBP14.85□□□□□ -0.03
SCFD2-201ENST00000388940 TRPM5Q9NZQ8 1165 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 STOML2Q9UJZ1 356 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 GPR45Q9Y5Y3 372 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 TET1Q8NFU7 2136 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 CENPFP49454 3210 aa14.85□□□□□ -0.03
SCFD2-201ENST00000388940 CBX4O00257 560 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 ANGPT2O15123 496 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 ESRRBO95718 433 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 CD160O95971 181 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 LINC00032P0C843 101 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 UROSP10746 265 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 CAPN3P20807 821 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 OR1D2P34982 312 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 CDKN1CP49918 316 aaPredicted RBP14.84□□□□□ -0.03
SCFD2-201ENST00000388940 ARF5P84085 180 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 VPS26BQ4G0F5 336 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 AARS2Q5JTZ9 985 aaKnown RBP14.84□□□□□ -0.03
SCFD2-201ENST00000388940 CTSL3PQ5NE16 218 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 CXorf57Q6NSI4 855 aaKnown RBP14.84□□□□□ -0.03
SCFD2-201ENST00000388940 PSAPL1Q6NUJ1 521 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 NCEH1Q6PIU2 408 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 OR2T34Q8NGX1 318 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 OR2T3Q8NH03 318 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 RAET1EQ8TD07 263 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 KCNJ9Q92806 393 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 CCT7Q99832 543 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 SEMA4BQ9NPR2 832 aaPredicted RBP14.84□□□□□ -0.03
SCFD2-201ENST00000388940 PFDN4Q9NQP4 134 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 TMEM45AQ9NWC5 275 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 GALPQ9UBC7 116 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 AFF4Q9UHB7 1163 aaKnown RBP14.84□□□□□ -0.03
SCFD2-201ENST00000388940 FKBPLQ9UIM3 349 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 TRMT6Q9UJA5 497 aaKnown RBP14.84□□□□□ -0.03
SCFD2-201ENST00000388940 PCTPQ9UKL6 214 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 PCDHGC4Q9Y5F7 938 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 ANAPC1Q9H1A4 1944 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 A0A1B0GTL3 188 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.84□□□□□ -0.03
SCFD2-201ENST00000388940 NPEPPSL1A6NEC2 478 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 AQP12BA6NM10 295 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 FXYD1O00168 92 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 BTN3A1O00481 513 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 PITPNM1O00562 1244 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 NME4O00746 187 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 STX7O15400 261 aaKnown RBP14.84□□□□□ -0.03
SCFD2-201ENST00000388940 GSTT1P30711 240 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 PTGER3P43115 390 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 RPL5P46777 297 aaKnown RBP14.84□□□□□ -0.03
SCFD2-201ENST00000388940 POLE2P56282 527 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 IL2P60568 153 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 BNIP2Q12982 314 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 TCTN1Q2MV58 587 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 INO80DQ53TQ3 878 aaPredicted RBP14.84□□□□□ -0.03
SCFD2-201ENST00000388940 XKR7Q5GH72 579 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 AQP12AQ8IXF9 295 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 FAM126BQ8IXS8 530 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 SLC15A3Q8IY34 581 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 RNF168Q8IYW5 571 aaPredicted RBP14.84□□□□□ -0.03
SCFD2-201ENST00000388940 LRRC43Q8N309 656 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 GALNT4Q8N4A0 578 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 CD200R1Q8TD46 325 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 SLC30A3Q99726 388 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 MRPS26Q9BYN8 205 aaKnown RBP14.84□□□□□ -0.03
SCFD2-201ENST00000388940 GKN1Q9NS71 199 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 GIMAP2Q9UG22 337 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 PADI4Q9UM07 663 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 LZTS1Q9Y250 596 aa14.84□□□□□ -0.03
SCFD2-201ENST00000388940 CRCPO75575 148 aa14.83□□□□□ -0.04
SCFD2-201ENST00000388940 ESR1P03372 595 aa14.83□□□□□ -0.04
SCFD2-201ENST00000388940 FAM58BPP0C7Q3 252 aa14.83□□□□□ -0.04
SCFD2-201ENST00000388940 MYBPC1Q00872 1141 aa14.83□□□□□ -0.04
SCFD2-201ENST00000388940 TRAF2Q12933 501 aa14.83□□□□□ -0.04
SCFD2-201ENST00000388940 IKBKEQ14164 716 aa14.83□□□□□ -0.04
SCFD2-201ENST00000388940 RPS6KA2Q15349 733 aa14.83□□□□□ -0.04
SCFD2-201ENST00000388940 C6orf52Q5T4I8 152 aa14.83□□□□□ -0.04
SCFD2-201ENST00000388940 CWF19L1Q69YN2 538 aaKnown RBP14.83□□□□□ -0.04
SCFD2-201ENST00000388940 UGT3A1Q6NUS8 523 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms