RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 PPM1MQ96MI6 270 aa5.84□□□□□ -1.47
RFX3-204ENST00000382004 TSSK3Q96PN8 268 aa5.84□□□□□ -1.47
RFX3-204ENST00000382004 ADAM2Q99965 735 aa5.84□□□□□ -1.47
RFX3-204ENST00000382004 ALG2Q9H553 416 aa5.84□□□□□ -1.47
RFX3-204ENST00000382004 GBA2Q9HCG7 927 aaPredicted RBP5.84□□□□□ -1.47
RFX3-204ENST00000382004 BLOC1S4Q9NUP1 217 aa5.84□□□□□ -1.47
RFX3-204ENST00000382004 RDH8Q9NYR8 311 aa5.84□□□□□ -1.47
RFX3-204ENST00000382004 IFT52Q9Y366 437 aa5.84□□□□□ -1.47
RFX3-204ENST00000382004 MFHAS1Q9Y4C4 1052 aa5.84□□□□□ -1.47
RFX3-204ENST00000382004 NLRP1Q9C000 1473 aa5.84□□□□□ -1.47
RFX3-204ENST00000382004 TNFRSF11BO00300 401 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 GSC2O15499 205 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 CALCAP01258 141 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 CTNNB1P35222 781 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 YAP1P46937 504 aaKnown RBP5.84□□□□□ -1.48
RFX3-204ENST00000382004 ARCN1P48444 511 aaKnown RBP5.84□□□□□ -1.48
RFX3-204ENST00000382004 AFF1P51825 1210 aaKnown RBP5.84□□□□□ -1.48
RFX3-204ENST00000382004 SLC20A2Q08357 652 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 DLG2Q15700 870 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 LPCAT4Q643R3 524 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 TTI2Q6NXR4 508 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 OR4C6Q8NH72 309 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 RIOK2Q9BVS4 552 aaKnown RBP5.84□□□□□ -1.48
RFX3-204ENST00000382004 FAM105AQ9NUU6 356 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 MTRRQ9UBK8 725 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 IQCF5A8MTL0 148 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 F8VP50 259 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 APOC4-APOC2K7ER74 178 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 PER2O15055 1255 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 REM1O75628 298 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 OAZ2O95190 189 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 APOC2P02655 101 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 LPOP22079 712 aaPredicted RBP5.84□□□□□ -1.48
RFX3-204ENST00000382004 S100A10P60903 97 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 USP4Q13107 963 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 DCST1Q5T197 706 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 GCNT6Q5T4J0 391 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 METTL7BQ6UX53 244 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 MPP5Q8N3R9 675 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 ZNF557Q8N988 423 aaPredicted RBP5.84□□□□□ -1.48
RFX3-204ENST00000382004 NXNL1Q96CM4 212 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 MTMR8Q96EF0 704 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 PRICKLE1Q96MT3 831 aaPredicted RBP5.84□□□□□ -1.48
RFX3-204ENST00000382004 ZDHHC15Q96MV8 337 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 ZYG11BQ9C0D3 744 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 TRPS1Q9UHF7 1281 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 NFASCO94856 1347 aa5.84□□□□□ -1.48
RFX3-204ENST00000382004 FADS2P1A8MWK0 482 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 C9IYK1 514 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 ZNF878C9JN71 531 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 PLK4O00444 970 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 PDCD5O14737 125 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 DDX6P26196 483 aaKnown RBP eCLIP5.83□□□□□ -1.48
RFX3-204ENST00000382004 ALDH4A1P30038 563 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 GJA9P57773 515 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 RPL6Q02878 288 aaKnown RBP5.83□□□□□ -1.48
RFX3-204ENST00000382004 CSTF1Q05048 431 aaKnown RBP5.83□□□□□ -1.48
RFX3-204ENST00000382004 ADNP2Q6IQ32 1131 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 OGFOD2Q6N063 350 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 ZNF782Q6ZMW2 699 aaPredicted RBP5.83□□□□□ -1.48
RFX3-204ENST00000382004 NUP54Q7Z3B4 507 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 FBXO33Q7Z6M2 555 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 RBM23Q86U06 439 aaKnown RBP5.83□□□□□ -1.48
RFX3-204ENST00000382004 C12orf50Q8NA57 414 aaPredicted RBP5.83□□□□□ -1.48
RFX3-204ENST00000382004 CEP76Q8TAP6 659 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 HDAC10Q969S8 669 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 NXPE2Q96DL1 559 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 RIPOR3Q96MK2 946 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 ZNF570Q96NI8 536 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 ENY2Q9NPA8 101 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 HCN3Q9P1Z3 774 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 SLC27A5Q9Y2P5 690 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 FADS3Q9Y5Q0 445 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 A0A0J9YYE9 177 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 OTOL1A6NHN0 477 aaPredicted RBP5.83□□□□□ -1.48
RFX3-204ENST00000382004 ORC5O43913 435 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 SSX5O60225 188 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 ZNF20P17024 532 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 SREBF1P36956 1147 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 CCR10P46092 362 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 RPP38P78345 283 aaKnown RBP5.83□□□□□ -1.48
RFX3-204ENST00000382004 TROAPQ12815 778 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 FAM46CQ5VWP2 391 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 WSCD1Q658N2 575 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 RAB12Q6IQ22 244 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 FAM35AQ86V20 835 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 OR2T12Q8NG77 320 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 FAM110BQ8TC76 370 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 OR8D1Q8WZ84 308 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 ZBTB45Q96K62 511 aaPredicted RBP5.83□□□□□ -1.48
RFX3-204ENST00000382004 GAD1Q99259 594 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 TBX5Q99593 518 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 GMIPQ9P107 970 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 ADAM28Q9UKQ2 775 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 RAP2CQ9Y3L5 183 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 LAMC1P11047 1609 aa5.83□□□□□ -1.48
RFX3-204ENST00000382004 TLX3O43711 291 aaPredicted RBP5.83□□□□□ -1.48
RFX3-204ENST00000382004 PLGP00747 810 aaPredicted RBP5.83□□□□□ -1.48
RFX3-204ENST00000382004 MTHFD1P11586 935 aaKnown RBP5.83□□□□□ -1.48
RFX3-204ENST00000382004 GPD2P43304 727 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms