RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 TEFMQ96QE5 360 aaKnown RBP12.87□□□□□ -0.35
RPAIN-202ENST00000381208 AGAP2Q99490 1192 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 DDA1Q9BW61 102 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 ZMYND15Q9H091 742 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 SLC25A51Q9H1U9 297 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 MAGEE1Q9HCI5 957 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 ST14Q9Y5Y6 855 aa12.87□□□□□ -0.35
RPAIN-202ENST00000381208 B4E171 279 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 C9orf172C9J069 976 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 EFSO43281 561 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 MTSS1O43312 755 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 NUAK1O60285 661 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 MFAP3LO75121 409 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 MMP2P08253 660 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 THRAP10827 490 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 ETV5P41161 510 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 TSPAN7P41732 249 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 EPHA4P54764 986 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 HHEXQ03014 270 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 TFDP2Q14188 446 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 IHHQ14623 411 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 ZNF569Q5MCW4 686 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-202ENST00000381208 WDR74Q6RFH5 385 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-202ENST00000381208 ZNF574Q6ZN55 896 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-202ENST00000381208 TRIM74Q86UV6 250 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 CPNE8Q86YQ8 564 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 PHYKPLQ8IUZ5 450 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 CNTD1Q8N815 330 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 SLC37A2Q8TED4 501 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 IMP4Q96G21 291 aaKnown RBP12.86□□□□□ -0.35
RPAIN-202ENST00000381208 OLFM3Q96PB7 478 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 NHEJ1Q9H9Q4 299 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-202ENST00000381208 PDP2Q9P2J9 529 aa12.86□□□□□ -0.35
RPAIN-202ENST00000381208 CNOT6Q9ULM6 557 aaKnown RBP12.86□□□□□ -0.35
RPAIN-202ENST00000381208 GCN1Q92616 2671 aaKnown RBP12.86□□□□□ -0.35
RPAIN-202ENST00000381208 A0A0U1RQS6 177 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 B8ZZF3 427 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 GRID2O43424 1007 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 KRT1P04264 644 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 F3P13726 295 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 TNNT3P45378 269 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-202ENST00000381208 PPM1FP49593 454 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-202ENST00000381208 CDK18Q07002 472 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 ZBTB17Q13105 803 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 TEX44Q53QW1 395 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 KIAA1614Q5VZ46 1190 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 IYDQ6PHW0 289 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 CHST15Q7LFX5 561 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-202ENST00000381208 RFX6Q8HWS3 928 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 TRAM1L1Q8N609 369 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 SMIM14Q96QK8 99 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 TRIB3Q96RU7 358 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 WDR24Q96S15 920 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 ZPBPQ9BS86 351 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 SPATA16Q9BXB7 569 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 GPR63Q9BZJ6 419 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 TRABDQ9H4I3 376 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 TRIM39Q9HCM9 518 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 FOXJ2Q9P0K8 574 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 PLEKHM1Q9Y4G2 1056 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 CFAP46Q8IYW2 2715 aa12.85□□□□□ -0.35
RPAIN-202ENST00000381208 A0A0A6YYK5 440 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-202ENST00000381208 C3orf70A6NLC5 250 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-202ENST00000381208 FADS2P1A8MWK0 482 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 CAPN5O15484 640 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-202ENST00000381208 PSTPIP1O43586 416 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 SPOPO43791 374 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 VEGFDO43915 354 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 SLC25A14O95258 325 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-202ENST00000381208 NDST3O95803 873 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 ATP1A1P05023 1023 aaKnown RBP12.84□□□□□ -0.35
RPAIN-202ENST00000381208 FGF3P11487 239 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-202ENST00000381208 CCL4P13236 92 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 PLA2G2AP14555 144 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 TGIF1Q15583 401 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 DCAF12Q5T6F0 453 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 NKAIN2Q5VXU1 208 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 ZDHHC20Q5W0Z9 365 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 TMC3Q7Z5M5 1100 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 ZFAND4Q86XD8 727 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 RCBTB1Q8NDN9 531 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 TADA1Q96BN2 335 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 AGAP3Q96P47 875 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 CHP1Q99653 195 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 ARHGAP9Q9BRR9 750 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 TSPY26PQ9H489 355 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 UCK1Q9HA47 277 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 LUC7LQ9NQ29 371 aaKnown RBP12.84□□□□□ -0.35
RPAIN-202ENST00000381208 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.84□□□□□ -0.35
RPAIN-202ENST00000381208 OAS3Q9Y6K5 1087 aaKnown RBP12.84□□□□□ -0.35
RPAIN-202ENST00000381208 SCN8AQ9UQD0 1980 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 ATMQ13315 3056 aa12.84□□□□□ -0.35
RPAIN-202ENST00000381208 A6NCN8 305 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 LILRA5A6NI73 299 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 AKR1B15C9JRZ8 316 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-202ENST00000381208 J3QKU1 62 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 EPOP01588 193 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 ACP5P13686 325 aa12.83□□□□□ -0.36
RPAIN-202ENST00000381208 CSF2RBP32927 897 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms