RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 PIP5K1BO14986 540 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 HS6ST1O60243 411 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 RASAL1O95294 804 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 CPB1P15086 417 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 TGFBR1P36897 503 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 CCT8P50990 548 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 IFITM3Q01628 133 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 PAFAH1B3Q15102 231 aaKnown RBP13.78□□□□□ -0.2
SDC1-202ENST00000381150 PFKFB4Q16877 469 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 UBE2UQ5VVX9 321 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 TWF2Q6IBS0 349 aaKnown RBP13.78□□□□□ -0.2
SDC1-202ENST00000381150 TAF2Q6P1X5 1199 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 SYTL1Q8IYJ3 562 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 NDNFQ8TB73 568 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 FIG4Q92562 907 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 ESAMQ96AP7 390 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 MRPL57Q9BQC6 102 aaKnown RBP13.78□□□□□ -0.2
SDC1-202ENST00000381150 WDR6Q9NNW5 1121 aaKnown RBP13.78□□□□□ -0.2
SDC1-202ENST00000381150 MAP10Q9P2G4 905 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 ANKRD6Q9Y2G4 727 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 SLC30A1Q9Y6M5 507 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 COL4A4P53420 1690 aaPredicted RBP13.78□□□□□ -0.2
SDC1-202ENST00000381150 MYADML2A6NDP7 307 aa13.77□□□□□ -0.2
SDC1-202ENST00000381150 ERI2A8K979 691 aaKnown RBP13.77□□□□□ -0.2
SDC1-202ENST00000381150 ZNF701M0R085 212 aaPredicted RBP13.77□□□□□ -0.2
SDC1-202ENST00000381150 TAF4O00268 1085 aa13.77□□□□□ -0.2
SDC1-202ENST00000381150 DCLK1O15075 740 aa13.77□□□□□ -0.2
SDC1-202ENST00000381150 SNPHO15079 494 aa13.77□□□□□ -0.2
SDC1-202ENST00000381150 SEC24AO95486 1093 aa13.77□□□□□ -0.2
SDC1-202ENST00000381150 SEMA3BQ13214 749 aa13.77□□□□□ -0.2
SDC1-202ENST00000381150 ATP6AP1Q15904 470 aa13.77□□□□□ -0.2
SDC1-202ENST00000381150 FSCN1Q16658 493 aaKnown RBP13.77□□□□□ -0.2
SDC1-202ENST00000381150 PYCR3Q53H96 274 aa13.77□□□□□ -0.2
SDC1-202ENST00000381150 PIM3Q86V86 326 aa13.77□□□□□ -0.2
SDC1-202ENST00000381150 GATAD2AQ86YP4 633 aa13.77□□□□□ -0.2
SDC1-202ENST00000381150 MFSD2AQ8NA29 543 aa13.77□□□□□ -0.2
SDC1-202ENST00000381150 NUDT8Q8WV74 236 aa13.77□□□□□ -0.2
SDC1-202ENST00000381150 LRRC58Q96CX6 371 aa13.77□□□□□ -0.2
SDC1-202ENST00000381150 SMOQ99835 787 aa13.77□□□□□ -0.2
SDC1-202ENST00000381150 BDH2Q9BUT1 245 aa13.77□□□□□ -0.2
SDC1-202ENST00000381150 SEMA4BQ9NPR2 832 aaPredicted RBP13.77□□□□□ -0.2
SDC1-202ENST00000381150 A8MV72 311 aaPredicted RBP13.77□□□□□ -0.21
SDC1-202ENST00000381150 TNPO2O14787 897 aaKnown RBP13.77□□□□□ -0.21
SDC1-202ENST00000381150 TBC1D4O60343 1298 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 CYP2B6P20813 491 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 HTR1BP28222 390 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 KCNK10P57789 538 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 RAB15P59190 212 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 LAPTM4AQ15012 233 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 OXA1LQ15070 435 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 UGP2Q16851 508 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 RAB41Q5JT25 222 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 INTS11Q5TA45 600 aaKnown RBP13.77□□□□□ -0.21
SDC1-202ENST00000381150 C17orf99Q6UX52 265 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 PDZD4Q76G19 769 aaPredicted RBP13.77□□□□□ -0.21
SDC1-202ENST00000381150 GPRIN1Q7Z2K8 1008 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 GALNT5Q7Z7M9 940 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 AKAP14Q86UN6 197 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 PLD3Q8IV08 490 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 C3orf58Q8NDZ4 430 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 WNT8BQ93098 351 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 SENP8Q96LD8 212 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 TBCDQ9BTW9 1192 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 DNAI2Q9GZS0 605 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 ARMC1Q9NVT9 282 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 FBXO5Q9UKT4 447 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 PCDHB3Q9Y5E6 796 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 YJEFN3A6XGL0 299 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 FAM155AB1AL88 458 aaPredicted RBP13.77□□□□□ -0.21
SDC1-202ENST00000381150 LRIG2O94898 1065 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 ITGB6P18564 788 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 TKTL1P51854 596 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 TMBIM6P55061 237 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 FOXA1P55317 472 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 MAP3K7CLP57077 242 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 CREB5Q02930 508 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 AGAP9Q5VTM2 703 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 BHLHA9Q7RTU4 235 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 ZNF555Q8NEP9 628 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 TOP1MTQ969P6 601 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 PABPC5Q96DU9 382 aaKnown RBP13.77□□□□□ -0.21
SDC1-202ENST00000381150 NSMCE2Q96MF7 247 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 OLFM1Q99784 485 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 FEM1AQ9BSK4 669 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 RNF38Q9H0F5 515 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 DDIT4Q9NX09 232 aa13.77□□□□□ -0.21
SDC1-202ENST00000381150 SCN10AQ9Y5Y9 1956 aa13.76□□□□□ -0.21
SDC1-202ENST00000381150 C16orf96A6NNT2 1141 aa13.76□□□□□ -0.21
SDC1-202ENST00000381150 HHLA1C9JL84 531 aa13.76□□□□□ -0.21
SDC1-202ENST00000381150 ASNA1O43681 348 aa13.76□□□□□ -0.21
SDC1-202ENST00000381150 SLC6A2P23975 617 aa13.76□□□□□ -0.21
SDC1-202ENST00000381150 CD68P34810 354 aaPredicted RBP13.76□□□□□ -0.21
SDC1-202ENST00000381150 RFC2P35250 354 aa13.76□□□□□ -0.21
SDC1-202ENST00000381150 ADRA1BP35368 520 aa13.76□□□□□ -0.21
SDC1-202ENST00000381150 NAPEPLDQ6IQ20 393 aa13.76□□□□□ -0.21
SDC1-202ENST00000381150 MICU2Q8IYU8 434 aa13.76□□□□□ -0.21
SDC1-202ENST00000381150 PELI3Q8N2H9 469 aa13.76□□□□□ -0.21
SDC1-202ENST00000381150 NPWQ8N729 165 aa13.76□□□□□ -0.21
SDC1-202ENST00000381150 TRPV1Q8NER1 839 aa13.76□□□□□ -0.21
SDC1-202ENST00000381150 TMBIM1Q969X1 311 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms