RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 TCF25Q9BQ70 676 aa14.2□□□□□ -0.14
CLCN4-201ENST00000380829 ADGRE3Q9BY15 652 aa14.2□□□□□ -0.14
CLCN4-201ENST00000380829 NUF2Q9BZD4 464 aa14.2□□□□□ -0.14
CLCN4-201ENST00000380829 POLR3BQ9NW08 1133 aaPredicted RBP14.2□□□□□ -0.14
CLCN4-201ENST00000380829 HCFC1R1Q9NWW0 138 aa14.2□□□□□ -0.14
CLCN4-201ENST00000380829 CHD7Q9P2D1 2997 aa14.2□□□□□ -0.14
CLCN4-201ENST00000380829 RIMKLBQ9ULI2 386 aa14.2□□□□□ -0.14
CLCN4-201ENST00000380829 MAFFQ9ULX9 164 aa14.2□□□□□ -0.14
CLCN4-201ENST00000380829 PCDHB9Q9Y5E1 797 aa14.2□□□□□ -0.14
CLCN4-201ENST00000380829 CARNS1A5YM72 827 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 A8MT66 165 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 JUNP05412 331 aaKnown RBP14.19□□□□□ -0.14
CLCN4-201ENST00000380829 PORP16435 677 aaPredicted RBP14.19□□□□□ -0.14
CLCN4-201ENST00000380829 OGNP20774 298 aaKnown RBP14.19□□□□□ -0.14
CLCN4-201ENST00000380829 CES1P23141 567 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 HOXD12P35452 270 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 KCNC1P48547 511 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 ERVFC1P60507 584 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 PFKPQ01813 784 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 PRKAA1Q13131 559 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 TBCCQ15814 346 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 KCTD21Q4G0X4 260 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 SEL1L3Q68CR1 1132 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 PHTF2Q8N3S3 785 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 RYBPQ8N488 228 aaPredicted RBP14.19□□□□□ -0.14
CLCN4-201ENST00000380829 EXT2Q93063 718 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 NCKIPSDQ9NZQ3 722 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 FKBPLQ9UIM3 349 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 SORCS3Q9UPU3 1222 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 DOCK6Q96HP0 2047 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 HIDE1A8MVS5 230 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 HDAC3O15379 428 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 SMAD6O43541 496 aaKnown RBP14.19□□□□□ -0.14
CLCN4-201ENST00000380829 DCXO43602 365 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 ZBTB14O43829 449 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 DNAJA2O60884 412 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 ADH1AP07327 375 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 LPOP22079 712 aaPredicted RBP14.19□□□□□ -0.14
CLCN4-201ENST00000380829 EPHA3P29320 983 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 FMO4P31512 558 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 ACAP2Q15057 778 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 TYSND1Q2T9J0 566 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 INO80DQ53TQ3 878 aaPredicted RBP14.19□□□□□ -0.14
CLCN4-201ENST00000380829 PLPP4Q5VZY2 271 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 GRAMD4Q6IC98 578 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 AFTPHQ6ULP2 937 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 AMIGO2Q86SJ2 522 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 PATL1Q86TB9 770 aaKnown RBP14.19□□□□□ -0.14
CLCN4-201ENST00000380829 FAM217AQ8IXS0 508 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 DCAF4L2Q8NA75 395 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 MRPS26Q9BYN8 205 aaKnown RBP14.19□□□□□ -0.14
CLCN4-201ENST00000380829 TCF7L2Q9NQB0 619 aa14.19□□□□□ -0.14
CLCN4-201ENST00000380829 TRAV19A0A0A6YYK7 116 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 LCHNA4D1U4 455 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 GPR39O43194 453 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 GRID2O43424 1007 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 IPO13O94829 963 aaKnown RBP14.18□□□□□ -0.14
CLCN4-201ENST00000380829 PRAMEF12O95522 483 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 RBP1P09455 135 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 CTPS1P17812 591 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 CDH2P19022 906 aaPredicted RBP14.18□□□□□ -0.14
CLCN4-201ENST00000380829 CCR2P41597 374 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 SLC7A9P82251 487 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 HTRA4P83105 476 aaPredicted RBP14.18□□□□□ -0.14
CLCN4-201ENST00000380829 ANKDD1AQ495B1 522 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 TMEM53Q6P2H8 277 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 CCDC149Q6ZUS6 474 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 ISCA2Q86U28 154 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 HPS6Q86YV9 775 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 PIANPQ8IYJ0 282 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 MARVELD2Q8N4S9 558 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 PTERQ96BW5 349 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 SLC46A2Q9BY10 475 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 PACSIN3Q9UKS6 424 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 FAM50BQ9Y247 325 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 SSX2IPQ9Y2D8 614 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 FIS1Q9Y3D6 152 aa14.18□□□□□ -0.14
CLCN4-201ENST00000380829 H3BNX3 289 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 LEFTY2O00292 366 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 E2F6O75461 281 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 FGBP02675 491 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 GKP32189 559 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 MC4RP32245 332 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 DNAJB13P59910 316 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 LMAN2Q12907 356 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 FAM219BQ5XKK7 198 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 PSAPL1Q6NUJ1 521 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 HTR3DQ70Z44 454 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 PIWIL4Q7Z3Z4 852 aaKnown RBP14.17□□□□□ -0.14
CLCN4-201ENST00000380829 CAMK1DQ8IU85 385 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 GPR65Q8IYL9 337 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 ELMOD1Q8N336 334 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 CLP1Q92989 425 aaKnown RBP14.17□□□□□ -0.14
CLCN4-201ENST00000380829 AARSD1Q9BTE6 412 aaKnown RBP14.17□□□□□ -0.14
CLCN4-201ENST00000380829 ASAH2Q9NR71 780 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 GTSE1Q9NYZ3 720 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 DNMT3BQ9UBC3 853 aaKnown RBP14.17□□□□□ -0.14
CLCN4-201ENST00000380829 CCL26Q9Y258 94 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 CEPT1Q9Y6K0 416 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 PDE4DIPQ5VU43 2346 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms