RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 OR6C75A6NL08 312 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 PDLIM1O00151 329 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 RNASEH1O60930 286 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 CAPN1P07384 714 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 CDH15P55291 814 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 SMAD3P84022 425 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 DUSP4Q13115 394 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 SLCO6A1Q86UG4 719 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 TDRD1Q9BXT4 1180 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 ARMC7Q9H6L4 198 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 LRTM1Q9HBL6 345 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 SELENONQ9NZV5 590 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 CACNG4Q9UBN1 327 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 EIF2B4Q9UI10 523 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 OAZ3Q9UMX2 235 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 BTBD3Q9Y2F9 522 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 PCDHGC4Q9Y5F7 938 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 RAI2Q9Y5P3 530 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 H3BSA7 217 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 GABRDO14764 452 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 TBL1XO60907 577 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 NR4A1P22736 598 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 HERVK_113P63132 956 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 GALNT2Q10471 571 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 SLC10A2Q12908 348 aaPredicted RBP12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 TIGD5Q53EQ6 642 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 RAB6CQ53S08 254 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 ANKRD12Q6UB98 2062 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 CYS1Q717R9 158 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 OR7D4Q8NG98 312 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 NELL1Q92832 810 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 TEPSINQ96N21 525 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 FAM210AQ96ND0 272 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 RBM4BQ9BQ04 359 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 RBM4Q9BWF3 364 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 ERVK-6Q9BXR3 956 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 RAB6CQ9H0N0 254 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 OSBPL2Q9H1P3 480 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 AKTIPQ9H8T0 292 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 FANCEQ9HB96 536 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 PLK2Q9NYY3 685 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 SLC2A6Q9UGQ3 507 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 KLHL20Q9Y2M5 609 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 TULP3O75386 442 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 FTH1P02794 183 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 RBM20Q5T481 1227 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 EGFLAMQ63HQ2 1017 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 KCTD8Q6ZWB6 473 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 DET1Q7L5Y6 550 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 HIPK1Q86Z02 1210 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 OR6K2Q8NGY2 324 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 ELMO1Q92556 727 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 PRRG3Q9BZD7 231 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 WDR12Q9GZL7 423 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 CD320Q9NPF0 282 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 GDAP2Q9NXN4 497 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 ZNF490Q9ULM2 529 aaPredicted RBP12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 ARIH1Q9Y4X5 557 aaPredicted RBP12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 PCDHB1Q9Y5F3 818 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 MYH4Q9Y623 1939 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 ALS2Q96Q42 1657 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 DHRS4L1P0CG22 281 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 HOXB6P17509 224 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 HDCP19113 662 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 PDZK1Q5T2W1 519 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 GALNT18Q6P9A2 607 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 CERS6Q6ZMG9 384 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 DEFB128Q7Z7B8 93 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 CPNE9Q8IYJ1 553 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 ARL10Q8N8L6 244 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 C19orf18Q8NEA5 215 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 PROX1Q92786 737 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 TOP1MTQ969P6 601 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 REPS1Q96D71 796 aa12.64□□□□□ -0.39
DNMT3A-204ENST00000380756 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 CCDC162PA2VCL2 907 aa12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 NFKBIEO00221 500 aa12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 CNPP09543 421 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 OGNP20774 298 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 TACR2P21452 398 aa12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 CCR10P46092 362 aa12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 HSPA7P48741 367 aa12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 SNRPD1P62314 119 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 GNA12Q03113 381 aa12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 IL10RBQ08334 325 aa12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 PABPC1LQ4VXU2 614 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 PAGE2BQ5JRK9 111 aa12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 LDLRAP1Q5SW96 308 aa12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 CIR1Q86X95 450 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 KBTBD8Q8NFY9 601 aa12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 MYDGFQ969H8 173 aa12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 APOLD1Q96LR9 279 aa12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 NUSAP1Q9BXS6 441 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 ITGB1BP2Q9UKP3 347 aa12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 SAMD4AQ9UPU9 718 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 SH3GLB1Q9Y371 365 aa12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 DGKBQ9Y6T7 804 aa12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 ANGPTL1O95841 491 aa12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 MTHFD1P11586 935 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-204ENST00000380756 CDK9P50750 372 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms