RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 RAB21Q9UL25 225 aa18.64■□□□□ 0.57
SMN2-202ENST00000380742 OAS3Q9Y6K5 1087 aaKnown RBP18.64■□□□□ 0.57
SMN2-202ENST00000380742 TDRD6O60522 2096 aaKnown RBP18.63■□□□□ 0.57
SMN2-202ENST00000380742 PIKFYVEQ9Y2I7 2098 aa18.63■□□□□ 0.57
SMN2-202ENST00000380742 PCDH15Q96QU1 1955 aa18.63■□□□□ 0.57
SMN2-202ENST00000380742 TOR1BO14657 336 aa18.63■□□□□ 0.57
SMN2-202ENST00000380742 CD3EAPO15446 510 aaKnown RBP18.63■□□□□ 0.57
SMN2-202ENST00000380742 SLC25A14O95258 325 aaPredicted RBP18.63■□□□□ 0.57
SMN2-202ENST00000380742 HOXC4P09017 264 aaPredicted RBP18.63■□□□□ 0.57
SMN2-202ENST00000380742 MYCLP1P12525 358 aaPredicted RBP18.63■□□□□ 0.57
SMN2-202ENST00000380742 NFATC4Q14934 902 aa18.63■□□□□ 0.57
SMN2-202ENST00000380742 KHDC1Q4VXA5 237 aaKnown RBP18.63■□□□□ 0.57
SMN2-202ENST00000380742 FASTKD1Q53R41 847 aaKnown RBP18.63■□□□□ 0.57
SMN2-202ENST00000380742 ZNF648Q5T619 568 aaPredicted RBP18.63■□□□□ 0.57
SMN2-202ENST00000380742 GPRC6AQ5T6X5 926 aa18.63■□□□□ 0.57
SMN2-202ENST00000380742 TAS2R42Q7RTR8 314 aa18.63■□□□□ 0.57
SMN2-202ENST00000380742 IQCHQ86VS3 1027 aa18.63■□□□□ 0.57
SMN2-202ENST00000380742 SERPINA9Q86WD7 417 aa18.63■□□□□ 0.57
SMN2-202ENST00000380742 NXPE1Q8N323 547 aa18.63■□□□□ 0.57
SMN2-202ENST00000380742 GSDMBQ8TAX9 411 aa18.63■□□□□ 0.57
SMN2-202ENST00000380742 CERS2Q96G23 380 aa18.63■□□□□ 0.57
SMN2-202ENST00000380742 TXLNGYQ9BZA5 131 aa18.63■□□□□ 0.57
SMN2-202ENST00000380742 ARRDC1-AS1Q9H2J1 176 aa18.63■□□□□ 0.57
SMN2-202ENST00000380742 CRLS1Q9UJA2 301 aa18.63■□□□□ 0.57
SMN2-202ENST00000380742 HCN4Q9Y3Q4 1203 aa18.63■□□□□ 0.57
SMN2-202ENST00000380742 TMEM202A6NGA9 273 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 PRR5-ARHGAP8B1AHC4 643 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 PATE3B3GLJ2 98 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 TLR4O00206 839 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 CACNB4O00305 520 aaPredicted RBP18.62■□□□□ 0.57
SMN2-202ENST00000380742 VILLO15195 856 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 MTX2O75431 263 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 ERVK-10P10266 1014 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 MCM3P25205 808 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 HOXD12P35452 270 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 DPP6P42658 865 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 KIAA1024LP59773 190 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 PDE1CQ14123 709 aaPredicted RBP18.62■□□□□ 0.57
SMN2-202ENST00000380742 FRG1Q14331 258 aaKnown RBP18.62■□□□□ 0.57
SMN2-202ENST00000380742 SLMAPQ14BN4 828 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 HSP90AA5PQ58FG0 334 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 NEPROQ6NW34 567 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 C3orf62Q6ZUJ4 267 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 LDB1Q86U70 411 aaPredicted RBP18.62■□□□□ 0.57
SMN2-202ENST00000380742 KCNMB4Q86W47 210 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 PHYKPLQ8IUZ5 450 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 DDHD1Q8NEL9 900 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 ULK4Q96C45 1275 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 CCDC97Q96F63 343 aaPredicted RBP18.62■□□□□ 0.57
SMN2-202ENST00000380742 MOCS1Q9NZB8 636 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 TMEM98Q9Y2Y6 226 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 PCDHGA5Q9Y5G8 931 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 MUC6Q6W4X9 2439 aa18.62■□□□□ 0.57
SMN2-202ENST00000380742 CACNA1EQ15878 2313 aa18.61■□□□□ 0.57
SMN2-202ENST00000380742 A0A1B0GVT2 93 aa18.61■□□□□ 0.57
SMN2-202ENST00000380742 GSTA2P09210 222 aa18.61■□□□□ 0.57
SMN2-202ENST00000380742 ACRV1P26436 265 aa18.61■□□□□ 0.57
SMN2-202ENST00000380742 MPLP40238 635 aa18.61■□□□□ 0.57
SMN2-202ENST00000380742 POLD2P49005 469 aa18.61■□□□□ 0.57
SMN2-202ENST00000380742 THOP1P52888 689 aa18.61■□□□□ 0.57
SMN2-202ENST00000380742 BNC1Q01954 994 aa18.61■□□□□ 0.57
SMN2-202ENST00000380742 OVGP1Q12889 678 aa18.61■□□□□ 0.57
SMN2-202ENST00000380742 CCDC6Q16204 474 aa18.61■□□□□ 0.57
SMN2-202ENST00000380742 DBN1Q16643 649 aa18.61■□□□□ 0.57
SMN2-202ENST00000380742 DUOXA1Q1HG43 343 aa18.61■□□□□ 0.57
SMN2-202ENST00000380742 KCTD16Q68DU8 428 aa18.61■□□□□ 0.57
SMN2-202ENST00000380742 SPATS2Q86XZ4 545 aaKnown RBP18.61■□□□□ 0.57
SMN2-202ENST00000380742 GPR150Q8NGU9 434 aa18.61■□□□□ 0.57
SMN2-202ENST00000380742 GDAP1Q8TB36 358 aa18.61■□□□□ 0.57
SMN2-202ENST00000380742 IARS2Q9NSE4 1012 aaKnown RBP18.61■□□□□ 0.57
SMN2-202ENST00000380742 PNMA8BQ9ULN7 279 aaPredicted RBP18.61■□□□□ 0.57
SMN2-202ENST00000380742 SPTY2D1-AS1A0A0U1RR47 76 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 TCRBV9S1A1TA0A576 114 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 CTIFO43310 598 aaKnown RBP18.6■□□□□ 0.57
SMN2-202ENST00000380742 C1QAP02745 245 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 CEACAM5P06731 702 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 F7P08709 466 aaPredicted RBP18.6■□□□□ 0.57
SMN2-202ENST00000380742 PMS2P54278 862 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 NXPH1P58417 271 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 B4GALNT1Q00973 533 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 THOC5Q13769 683 aaKnown RBP18.6■□□□□ 0.57
SMN2-202ENST00000380742 FZD2Q14332 565 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 TEAD4Q15561 434 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 PLA2G2CQ5R387 149 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 LDLRAP1Q5SW96 308 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 DOK6Q6PKX4 331 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 MACC1Q6ZN28 852 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 ADGRG6Q86SQ4 1221 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 DCP2Q8IU60 420 aaKnown RBP18.6■□□□□ 0.57
SMN2-202ENST00000380742 OTUD6BQ8N6M0 293 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 MYRIPQ8NFW9 859 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 CEP76Q8TAP6 659 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 AENQ8WTP8 325 aaKnown RBP18.6■□□□□ 0.57
SMN2-202ENST00000380742 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.6■□□□□ 0.57
SMN2-202ENST00000380742 WDR92Q96MX6 357 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 TTC25Q96NG3 672 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 BOCQ9BWV1 1114 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 SMOC1Q9H4F8 434 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 VPS37BQ9H9H4 285 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 CAPN10Q9HC96 672 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms